Difference between revisions of "TSS:Hg 109454.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=149 |entrez_id=220965 |gc_percent=0.696517 |gene_alias=FAM13C1 |gene_description=family with sequence similarity 13 member C |ge...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:19371 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| + | |distance=48 | ||
|distance_to_tss=149 | |distance_to_tss=149 | ||
| + | |end=59362759 | ||
| + | |end_of_center_position=59362754 | ||
|entrez_id=220965 | |entrez_id=220965 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=FAM13C1 | |gene_alias=FAM13C1 | ||
|gene_description=family with sequence similarity 13 member C | |gene_description=family with sequence similarity 13 member C | ||
| − | |gene_name=FAM13C | + | |gene_id=220965 |
| + | |gene_name=family with sequence similarity 13 member C | ||
| + | |gene_source=HGNC:19371 | ||
| + | |gene_symbol=FAM13C | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:19371 | ||
|nearest_ensembl=ENSG00000148541 | |nearest_ensembl=ENSG00000148541 | ||
|nearest_promoter_id=NM_001347847 | |nearest_promoter_id=NM_001347847 | ||
|nearest_refseq=NM_198215 | |nearest_refseq=NM_198215 | ||
|nearest_unigene=Hs.607594 | |nearest_unigene=Hs.607594 | ||
| + | |num_trans=220965 | ||
| + | |species=human | ||
| + | |start=59362748 | ||
| + | |start_of_center_position=59362753 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000470220.5 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_109454.1 | |tss_id=hg_109454.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 20:58, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 59362753 |
|---|---|
| End of the center position in the TSS region: | 59362754 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000470220.5 |
|---|---|
| Distance: | 48 |
| Num_trans: | 220965 |
| All_trans: | HGNC:19371 |
TATA-Box annotation
| Distance to TSS: | 149 |
|---|---|
| Nearest PromoterID: | NM_001347847 |
| Entrez ID: | 220965 |
| Nearest Unigene: | Hs.607594 |
| Nearest Refseq: | NM_198215 |
| Nearest Ensembl: | ENSG00000148541 |
| Gene Name: | family with sequence similarity 13 member C |
| Gene Alias: | FAM13C1 |
| Gene Description: | family with sequence similarity 13 member C |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
