Difference between revisions of "TSS:Hg 109460.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:19371 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=28 | |distance_to_tss=28 | ||
|end=59362882 | |end=59362882 | ||
| + | |end_of_center_position=59362875 | ||
|entrez_id=220965 | |entrez_id=220965 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_198215 | |nearest_refseq=NM_198215 | ||
|nearest_unigene=Hs.607594 | |nearest_unigene=Hs.607594 | ||
| − | |num_trans= | + | |num_trans=220965 |
|species=human | |species=human | ||
|start=59362867 | |start=59362867 | ||
| + | |start_of_center_position=59362874 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000468840.6 | + | |transcript_name=ENST00000468840.6 AK299924 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_109460.1 | |tss_id=hg_109460.1 | ||
Latest revision as of 20:58, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 59362874 |
|---|---|
| End of the center position in the TSS region: | 59362875 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000468840.6 AK299924 |
|---|---|
| Distance: | -21 |
| Num_trans: | 220965 |
| All_trans: | HGNC:19371 |
TATA-Box annotation
| Distance to TSS: | 28 |
|---|---|
| Nearest PromoterID: | NM_001347847 |
| Entrez ID: | 220965 |
| Nearest Unigene: | Hs.607594 |
| Nearest Refseq: | NM_198215 |
| Nearest Ensembl: | ENSG00000148541 |
| Gene Name: | family with sequence similarity 13 member C |
| Gene Alias: | FAM13C1 |
| Gene Description: | family with sequence similarity 13 member C |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
