Difference between revisions of "TSS:Hg 109503.1"
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{{TSSDetail | {{TSSDetail | ||
|MRT37= | |MRT37= | ||
| − | |all_trans= | + | |all_trans=AL136710:42 AK292927:-157 ENST00000486349.2:202 ENST00000355288.6:-271 NM_001149:-271 AK092527:-271 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=285 | |distance_to_tss=285 | ||
|end=60140745 | |end=60140745 | ||
| Line 10: | Line 10: | ||
|entrez_id=288 | |entrez_id=288 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| − | |gene_alias=ANKYRIN-G | + | |gene_alias=ANKYRIN-G{{!}}MRT37 |
|gene_description=ankyrin 3 | |gene_description=ankyrin 3 | ||
|gene_id=288 | |gene_id=288 | ||
| − | |gene_name= | + | |gene_name=ankyrin 3 |
|gene_source=HGNC:494 | |gene_source=HGNC:494 | ||
|gene_symbol=ANK3 | |gene_symbol=ANK3 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001149 | |nearest_refseq=NM_001149 | ||
|nearest_unigene=Hs.499725 | |nearest_unigene=Hs.499725 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=60140716 | |start=60140716 | ||
|start_of_center_position=60140730 | |start_of_center_position=60140730 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=56(AGCTTTAAAAGG,-,0.00),57(GCTTTAAAAGGA,+,0.00) |
| − | |transcript_name= | + | |transcript_name=NM_001149.4 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_109503.1 | |tss_id=hg_109503.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 20:59, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 60140730 |
|---|---|
| End of the center position in the TSS region: | 60140731 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001149.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | AL136710:42 AK292927:-157 ENST00000486349.2:202 ENST00000355288.6:-271 NM_001149:-271 AK092527:-271 |
TATA-Box annotation
| Distance to TSS: | 285 |
|---|---|
| Nearest PromoterID: | NM_001149 |
| Entrez ID: | 288 |
| Nearest Unigene: | Hs.499725 |
| Nearest Refseq: | NM_001149 |
| Nearest Ensembl: | ENSG00000151150 |
| Gene Name: | ankyrin 3 |
| Gene Alias: | ANKYRIN-G|MRT37 |
| Gene Description: | ankyrin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 56(AGCTTTAAAAGG,-,0.00),57(GCTTTAAAAGGA,+,0.00) |
