Difference between revisions of "TSS:Hg 109504.1"
From referenceTSS
| Line 4: | Line 4: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=12 |
|distance_to_tss=257 | |distance_to_tss=257 | ||
|end=60140766 | |end=60140766 | ||
| Line 29: | Line 29: | ||
|strand=- | |strand=- | ||
|tata_box=84(AGCTTTAAAAGG,-,0.00),85(GCTTTAAAAGGA,+,0.00) | |tata_box=84(AGCTTTAAAAGG,-,0.00),85(GCTTTAAAAGGA,+,0.00) | ||
| − | |transcript_name= | + | |transcript_name=NM_001149.4 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_109504.1 | |tss_id=hg_109504.1 | ||
Latest revision as of 20:59, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 60140758 |
|---|---|
| End of the center position in the TSS region: | 60140759 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001149.4 |
|---|---|
| Distance: | 12 |
| Num_trans: | 6 |
| All_trans: | AL136710:77 AK292927:-136 ENST00000486349.2:237 ENST00000355288.6:-250 NM_001149:-250 AK092527:-250 |
TATA-Box annotation
| Distance to TSS: | 257 |
|---|---|
| Nearest PromoterID: | NM_001149 |
| Entrez ID: | 288 |
| Nearest Unigene: | Hs.499725 |
| Nearest Refseq: | NM_001149 |
| Nearest Ensembl: | ENSG00000151150 |
| Gene Name: | ankyrin 3 |
| Gene Alias: | ANKYRIN-G|MRT37 |
| Gene Description: | ankyrin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 84(AGCTTTAAAAGG,-,0.00),85(GCTTTAAAAGGA,+,0.00) |
