Difference between revisions of "TSS:Hg 111727.1"
From referenceTSS
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| Line 11: | Line 11: | ||
|TK14= | |TK14= | ||
|TK25= | |TK25= | ||
| + | |all_trans=HGNC:3689 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=45826 | |distance_to_tss=45826 | ||
|end=121485493 | |end=121485493 | ||
| + | |end_of_center_position=121485488 | ||
|entrez_id=2263 | |entrez_id=2263 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=BBDS | + | |gene_alias=BBDS{{!}}BEK{{!}}BFR-1{{!}}CD332{{!}}CEK3{{!}}CFD1{{!}}ECT1{{!}}JWS{{!}}K-SAM{{!}}KGFR{{!}}TK14{{!}}TK25 |
|gene_description=fibroblast growth factor receptor 2 | |gene_description=fibroblast growth factor receptor 2 | ||
| − | |gene_name=FGFR2 | + | |gene_id=2263 |
| + | |gene_name=fibroblast growth factor receptor 2 | ||
| + | |gene_source=HGNC:3689 | ||
| + | |gene_symbol=FGFR2 | ||
| + | |gene_synonyms=CD332 CEK3 ECT1 K-SAM TK14 TK25 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3689 | ||
|nearest_ensembl=ENSG00000066468 | |nearest_ensembl=ENSG00000066468 | ||
|nearest_promoter_id=NM_001320654 | |nearest_promoter_id=NM_001320654 | ||
|nearest_refseq=NM_000141 | |nearest_refseq=NM_000141 | ||
|nearest_unigene=Hs.533683 | |nearest_unigene=Hs.533683 | ||
| − | |num_trans= | + | |num_trans=2263 |
|species=human | |species=human | ||
|start=121485482 | |start=121485482 | ||
| + | |start_of_center_position=121485487 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=30(AACTTTTTAAGC,-,0.00),32(CTTTTTAAGCTG,+,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000638709.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_111727.1 | |tss_id=hg_111727.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A1W2PQT9 | ||
}} | }} | ||
Latest revision as of 21:47, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 121485487 |
|---|---|
| End of the center position in the TSS region: | 121485488 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000638709.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2263 |
| All_trans: | HGNC:3689 |
TATA-Box annotation
| Distance to TSS: | 45826 |
|---|---|
| Nearest PromoterID: | NM_001320654 |
| Entrez ID: | 2263 |
| Nearest Unigene: | Hs.533683 |
| Nearest Refseq: | NM_000141 |
| Nearest Ensembl: | ENSG00000066468 |
| Gene Name: | fibroblast growth factor receptor 2 |
| Gene Alias: | BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 |
| Gene Description: | fibroblast growth factor receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 30(AACTTTTTAAGC,-,0.00),32(CTTTTTAAGCTG,+,0.00) |
