Difference between revisions of "TSS:Hg 111740.1"
From referenceTSS
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| Line 11: | Line 11: | ||
|TK14= | |TK14= | ||
|TK25= | |TK25= | ||
| − | |all_trans= | + | |all_trans=HGNC:3689 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=14 |
|end=121598461 | |end=121598461 | ||
|end_of_center_position=121598431 | |end_of_center_position=121598431 | ||
|entrez_id=2263 | |entrez_id=2263 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=BBDS | + | |gene_alias=BBDS{{!}}BEK{{!}}BFR-1{{!}}CD332{{!}}CEK3{{!}}CFD1{{!}}ECT1{{!}}JWS{{!}}K-SAM{{!}}KGFR{{!}}TK14{{!}}TK25 |
|gene_description=fibroblast growth factor receptor 2 | |gene_description=fibroblast growth factor receptor 2 | ||
|gene_id=2263 | |gene_id=2263 | ||
| Line 30: | Line 30: | ||
|hgnc_mgi_id=HGNC:3689 | |hgnc_mgi_id=HGNC:3689 | ||
|nearest_ensembl=ENSG00000066468 | |nearest_ensembl=ENSG00000066468 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_073009 |
|nearest_refseq=NM_000141 | |nearest_refseq=NM_000141 | ||
|nearest_unigene=Hs.533683 | |nearest_unigene=Hs.533683 | ||
| − | |num_trans= | + | |num_trans=2263 |
|species=human | |species=human | ||
|start=121598399 | |start=121598399 | ||
|start_of_center_position=121598430 | |start_of_center_position=121598430 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000613048.4 ENST00000356226.8 ENST00000604236.5 ENST00000369059.5 ENST00000457416.6 ENST00000360144.7 | + | |transcript_name=ENST00000358487.10 ENST00000613048.4 ENST00000356226.8 ENST00000604236.5 ENST00000369059.5 ENST00000457416.6 ENST00000360144.7 BC039243 BC096749 M97193 AK026508 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_111740.1 | |tss_id=hg_111740.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=D2CGD1 E7EVR7 P21802 S4R3B2 | + | |uniprot_id=A0A141AXF1 D2CGD1 E7EVR7 P21802 S4R3B2 |
}} | }} | ||
Latest revision as of 21:47, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 121598430 |
|---|---|
| End of the center position in the TSS region: | 121598431 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000358487.10 ENST00000613048.4 ENST00000356226.8 ENST00000604236.5 ENST00000369059.5 ENST00000457416.6 ENST00000360144.7 BC039243 BC096749 M97193 AK026508 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2263 |
| All_trans: | HGNC:3689 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NR_073009 |
| Entrez ID: | 2263 |
| Nearest Unigene: | Hs.533683 |
| Nearest Refseq: | NM_000141 |
| Nearest Ensembl: | ENSG00000066468 |
| Gene Name: | fibroblast growth factor receptor 2 |
| Gene Alias: | BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 |
| Gene Description: | fibroblast growth factor receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
