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Difference between revisions of "TSS:Hg 11543.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC073915:6 BC111382:78 ENST00000432622.1:-144 NM_001167676:-144 uc021oku.1:-144 ENST00000428500.1:258 uc057ekm.1:258 BC064432:-457
+
|all_trans=HGNC:44652
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.11
 
|cpg_percent=0.11
Line 6: Line 6:
 
|distance_to_tss=153
 
|distance_to_tss=153
 
|end=32362099
 
|end=32362099
 +
|end_of_center_position=32362091
 
|entrez_id=100128071
 
|entrez_id=100128071
 
|gc_percent=0.751244
 
|gc_percent=0.751244
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|nearest_refseq=NM_001167676
 
|nearest_refseq=NM_001167676
 
|nearest_unigene=Hs.512763
 
|nearest_unigene=Hs.512763
|num_trans=8
+
|num_trans=100128071
 
|species=human
 
|species=human
 
|start=32362081
 
|start=32362081
 +
|start_of_center_position=32362090
 
|strand=-
 
|strand=-
 
|transcript_name=BC073915
 
|transcript_name=BC073915

Latest revision as of 23:08, 19 July 2021

Basic information about the TSS


TSS ID:hg_11543.1
Species:human
Chr:chr1
TSS Classification:yes
Start:32362081
End:32362099
Strand:-
TSS Score:1
Start of the center position in the TSS region:32362090
End of the center position in the TSS region:32362091



Gene and protein annotation


Transcript_name:BC073915
Distance:6
GeneID:100128071
HGNC/MGI_ID:HGNC:44652
UniProt_ID:
Gene_name:family with sequence similarity 229 member A
Gene_symbol:FAM229A
Gene_synonyms:
Gene_source:HGNC:44652



Transcript annotation


Transcript_name:BC073915
Distance:6
Num_trans:100128071
All_trans:HGNC:44652



TATA-Box annotation


Distance to TSS:153
Nearest PromoterID:NM_001167676
Entrez ID:100128071
Nearest Unigene:Hs.512763
Nearest Refseq:NM_001167676
Nearest Ensembl:ENSG00000225828
Gene Name:family with sequence similarity 229 member A
Gene Alias:-
Gene Description:family with sequence similarity 229 member A
Gene Type:protein-coding
CpG%:0.11
GC%:0.751244
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):