Difference between revisions of "TSS:Hg 116167.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|NAADALASE2= | |NAADALASE2= | ||
|NAALADASE2= | |NAALADASE2= | ||
| − | |all_trans= | + | |all_trans=HGNC:14526 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=88 |
| − | |distance_to_tss=- | + | |distance_to_tss=-143 |
|end=90134527 | |end=90134527 | ||
| + | |end_of_center_position=90134521 | ||
|entrez_id=10003 | |entrez_id=10003 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=GCPIII | + | |gene_alias=GCPIII{{!}}GPCIII{{!}}NAADALASE2{{!}}NAALADASE2 |
|gene_description=N-acetylated alpha-linked acidic dipeptidase 2 | |gene_description=N-acetylated alpha-linked acidic dipeptidase 2 | ||
|gene_id=10003 | |gene_id=10003 | ||
| Line 17: | Line 18: | ||
|gene_source=HGNC:14526 | |gene_source=HGNC:14526 | ||
|gene_symbol=NAALAD2 | |gene_symbol=NAALAD2 | ||
| − | |gene_synonyms= | + | |gene_synonyms=GCPIII NAALADASE2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:14526 | |hgnc_mgi_id=HGNC:14526 | ||
| Line 24: | Line 25: | ||
|nearest_refseq=NM_005467 | |nearest_refseq=NM_005467 | ||
|nearest_unigene=Hs.112482 | |nearest_unigene=Hs.112482 | ||
| − | |num_trans= | + | |num_trans=10003 |
|species=human | |species=human | ||
|start=90134513 | |start=90134513 | ||
| + | |start_of_center_position=90134520 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000527493.5 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_116167.1 | |tss_id=hg_116167.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=E9PJV2 |
}} | }} | ||
Latest revision as of 23:24, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 90134520 |
|---|---|
| End of the center position in the TSS region: | 90134521 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000527493.5 |
|---|---|
| Distance: | 88 |
| Num_trans: | 10003 |
| All_trans: | HGNC:14526 |
TATA-Box annotation
| Distance to TSS: | -143 |
|---|---|
| Nearest PromoterID: | NM_001300930 |
| Entrez ID: | 10003 |
| Nearest Unigene: | Hs.112482 |
| Nearest Refseq: | NM_005467 |
| Nearest Ensembl: | ENSG00000077616 |
| Gene Name: | N-acetylated alpha-linked acidic dipeptidase 2 |
| Gene Alias: | GCPIII|GPCIII|NAADALASE2|NAALADASE2 |
| Gene Description: | N-acetylated alpha-linked acidic dipeptidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
