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Difference between revisions of "TSS:Hg 117686.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000529070.1:-16 AK308670:-16 ENST00000655895.1:32 ENST00000533091.1:111 ENST00000527712.1:120 ENST00000662392.1:-281 ENST00000662879.1:-387 NR_027276:-396 AK125302:-396 ENST00000533922.6:-407 ENST00000532706.2:-452
+
|all_trans=HGNC:54248
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.035
 
|cpg_percent=0.035
Line 22: Line 22:
 
|nearest_refseq=NR_027276
 
|nearest_refseq=NR_027276
 
|nearest_unigene=Hs.423734
 
|nearest_unigene=Hs.423734
|num_trans=11
+
|num_trans=100128239
 
|species=human
 
|species=human
 
|start=134032667
 
|start=134032667

Latest revision as of 23:57, 19 July 2021

Basic information about the TSS


TSS ID:hg_117686.1
Species:human
Chr:chr11
TSS Classification:yes
Start:134032667
End:134032685
Strand:+
TSS Score:1
Start of the center position in the TSS region:134032676
End of the center position in the TSS region:134032677



Gene and protein annotation


Transcript_name:ENST00000529070.1 AK308670
Distance:-16
GeneID:100128239
HGNC/MGI_ID:HGNC:54248
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 2731
Gene_symbol:LINC02731
Gene_synonyms:
Gene_source:HGNC:54248



Transcript annotation


Transcript_name:ENST00000529070.1 AK308670
Distance:-16
Num_trans:100128239
All_trans:HGNC:54248



TATA-Box annotation


Distance to TSS:404
Nearest PromoterID:NR_027276
Entrez ID:100128239
Nearest Unigene:Hs.423734
Nearest Refseq:NR_027276
Nearest Ensembl:ENSG00000204241
Gene Name:long intergenic non-protein coding RNA 2731
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 2731
Gene Type:ncRNA
CpG%:0.035
GC%:0.656716
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):