Difference between revisions of "TSS:Hg 123311.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000537514.1:30 NR_122124:30 uc001qim.1:30 AK056115:30 |chr=chr12 |cpg_percent=0.075 |distance=30 |distance_to_tss=-36 |end=630861 |entrez_id=10004...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:40405 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-36 | |distance_to_tss=-36 | ||
|end=630861 | |end=630861 | ||
| + | |end_of_center_position=630855 | ||
|entrez_id=100049716 | |entrez_id=100049716 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| Line 11: | Line 12: | ||
|gene_description=uncharacterized LOC100049716 | |gene_description=uncharacterized LOC100049716 | ||
|gene_id=100049716 | |gene_id=100049716 | ||
| − | |gene_name= | + | |gene_name=NINJ2 antisense RNA 1 |
| − | |gene_source= | + | |gene_source=HGNC:40405 |
| − | |gene_symbol= | + | |gene_symbol=NINJ2-AS1 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:40405 |
|nearest_ensembl=ENSG00000177406 | |nearest_ensembl=ENSG00000177406 | ||
|nearest_promoter_id=NR_122124 | |nearest_promoter_id=NR_122124 | ||
|nearest_refseq=NR_122124 | |nearest_refseq=NR_122124 | ||
|nearest_unigene=Hs.655804 | |nearest_unigene=Hs.655804 | ||
| − | |num_trans= | + | |num_trans=100049716 |
|species=human | |species=human | ||
|start=630848 | |start=630848 | ||
| + | |start_of_center_position=630854 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000666212.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_123311.1 | |tss_id=hg_123311.1 | ||
Latest revision as of 02:01, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 630854 |
|---|---|
| End of the center position in the TSS region: | 630855 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000666212.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100049716 |
| All_trans: | HGNC:40405 |
TATA-Box annotation
| Distance to TSS: | -36 |
|---|---|
| Nearest PromoterID: | NR_122124 |
| Entrez ID: | 100049716 |
| Nearest Unigene: | Hs.655804 |
| Nearest Refseq: | NR_122124 |
| Nearest Ensembl: | ENSG00000177406 |
| Gene Name: | NINJ2 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100049716 |
| Gene Type: | ncRNA |
| CpG%: | 0.075 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
