Difference between revisions of "TSS:Hg 124203.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000622602.1:-441 uc058lgq.1:-441 NM_001271592:-482 uc021qvh.3:-482 |chr=chr12 |cpg_percent=0.08 |distance=-441 |distance_to_tss=-64 |end=11171716...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:49847 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance=- | + | |distance=-469 |
|distance_to_tss=-64 | |distance_to_tss=-64 | ||
|end=11171716 | |end=11171716 | ||
| + | |end_of_center_position=11171690 | ||
|entrez_id=100533464 | |entrez_id=100533464 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_037918 | |nearest_refseq=NR_037918 | ||
|nearest_unigene=Hs.732031 | |nearest_unigene=Hs.732031 | ||
| − | |num_trans= | + | |num_trans=100129361 |
|species=human | |species=human | ||
|start=11171662 | |start=11171662 | ||
| + | |start_of_center_position=11171689 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000622602. | + | |transcript_name=ENST00000622602.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_124203.1 | |tss_id=hg_124203.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A0G2JPJ8 | + | |uniprot_id=A0A0G2JPJ8 P0DMW3 |
}} | }} | ||
Latest revision as of 02:20, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 11171689 |
|---|---|
| End of the center position in the TSS region: | 11171690 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000622602.2 |
|---|---|
| Distance: | -469 |
| Num_trans: | 100129361 |
| All_trans: | HGNC:49847 |
TATA-Box annotation
| Distance to TSS: | -64 |
|---|---|
| Nearest PromoterID: | NR_037918 |
| Entrez ID: | 100533464 |
| Nearest Unigene: | Hs.732031 |
| Nearest Refseq: | NR_037918 |
| Nearest Ensembl: | ENSG00000275778 |
| Gene Name: | small integral membrane protein 10 like 1 |
| Gene Alias: | PRH1 |
| Gene Description: | PRH1-PRR4 readthrough |
| Gene Type: | ncRNA |
| CpG%: | 0.08 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
