Difference between revisions of "TSS:Hg 128988.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|HRMT1L4= | |HRMT1L4= | ||
| + | |all_trans=ENST00000636557.1:0 ENST00000637529.1:0 NR_148995:0 | ||
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=8 |
|end=3366134 | |end=3366134 | ||
|end_of_center_position=3366114 | |end_of_center_position=3366114 | ||
| − | |entrez_id= | + | |entrez_id=100128253 |
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=uncharacterized LOC100128253 |
| − | |gene_name= | + | |gene_id=100128253 |
| − | |gene_type= | + | |gene_name=uncharacterized LOC100128253 |
| − | |nearest_ensembl= | + | |gene_source=EntrezGene:100128253 |
| − | |nearest_promoter_id= | + | |gene_symbol=LOC100128253 |
| − | |nearest_refseq= | + | |gene_synonyms= |
| − | |nearest_unigene=Hs. | + | |gene_type=ncRNA |
| − | |num_trans= | + | |hgnc_mgi_id= |
| + | |nearest_ensembl= | ||
| + | |nearest_promoter_id=NR_148995 | ||
| + | |nearest_refseq=NR_148995 | ||
| + | |nearest_unigene=Hs.447497 | ||
| + | |num_trans=3 | ||
|species=human | |species=human | ||
|start=3366093 | |start=3366093 | ||
|start_of_center_position=3366113 | |start_of_center_position=3366113 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000636557.1 ENST00000637529.1 NR_148995.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_128988.1 | |tss_id=hg_128988.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 04:03, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3366113 |
|---|---|
| End of the center position in the TSS region: | 3366114 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000636557.1 ENST00000637529.1 NR_148995.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000636557.1:0 ENST00000637529.1:0 NR_148995:0 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NR_148995 |
| Entrez ID: | 100128253 |
| Nearest Unigene: | Hs.447497 |
| Nearest Refseq: | NR_148995 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC100128253 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100128253 |
| Gene Type: | ncRNA |
| CpG%: | 0.15 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
