Difference between revisions of "TSS:Hg 128989.1"
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{{TSSDetail | {{TSSDetail | ||
|HRMT1L4= | |HRMT1L4= | ||
| + | |all_trans=ENST00000636557.1:22 NR_148995:22 ENST00000637529.1:32 | ||
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| − | |distance= | + | |distance=22 |
| − | |distance_to_tss=- | + | |distance_to_tss=-27 |
|end=3366154 | |end=3366154 | ||
|end_of_center_position=3366149 | |end_of_center_position=3366149 | ||
| − | |entrez_id= | + | |entrez_id=100128253 |
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=uncharacterized LOC100128253 |
| − | |gene_name= | + | |gene_id=100128253 |
| − | |gene_type= | + | |gene_name=uncharacterized LOC100128253 |
| − | |nearest_ensembl= | + | |gene_source=EntrezGene:100128253 |
| − | |nearest_promoter_id= | + | |gene_symbol=LOC100128253 |
| − | |nearest_refseq= | + | |gene_synonyms= |
| − | |nearest_unigene=Hs. | + | |gene_type=ncRNA |
| − | |num_trans= | + | |hgnc_mgi_id= |
| + | |nearest_ensembl= | ||
| + | |nearest_promoter_id=NR_148995 | ||
| + | |nearest_refseq=NR_148995 | ||
| + | |nearest_unigene=Hs.447497 | ||
| + | |num_trans=3 | ||
|species=human | |species=human | ||
|start=3366143 | |start=3366143 | ||
|start_of_center_position=3366148 | |start_of_center_position=3366148 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000636557.1 NR_148995.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_128989.1 | |tss_id=hg_128989.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 04:03, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3366148 |
|---|---|
| End of the center position in the TSS region: | 3366149 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000636557.1 NR_148995.1 |
|---|---|
| Distance: | 22 |
| Num_trans: | 3 |
| All_trans: | ENST00000636557.1:22 NR_148995:22 ENST00000637529.1:32 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NR_148995 |
| Entrez ID: | 100128253 |
| Nearest Unigene: | Hs.447497 |
| Nearest Refseq: | NR_148995 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC100128253 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100128253 |
| Gene Type: | ncRNA |
| CpG%: | 0.145 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
