Personal tools

Difference between revisions of "TSS:Hg 131922.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000536648.5:0 ENST00000504038.2:0 NR_120478:0 AY387666:0 AY387665:0 ENST00000356215.5:-453 AK128707:-453
+
|all_trans=HGNC:53973
 
|chr=chr12
 
|chr=chr12
 
|cpg_percent=0.005
 
|cpg_percent=0.005
Line 22: Line 22:
 
|nearest_refseq=NR_120478
 
|nearest_refseq=NR_120478
 
|nearest_unigene=Hs.685856
 
|nearest_unigene=Hs.685856
|num_trans=7
+
|num_trans=100129940
 
|species=human
 
|species=human
 
|start=65881570
 
|start=65881570
 
|start_of_center_position=65881579
 
|start_of_center_position=65881579
 
|strand=-
 
|strand=-
|transcript_name=ENST00000536648.5 ENST00000504038.2 NR_120478 AY387666 AY387665
+
|transcript_name=ENST00000536648.5 ENST00000504038.2 AY387665
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=hg_131922.1
 
|tss_id=hg_131922.1

Latest revision as of 05:07, 20 July 2021

Basic information about the TSS


TSS ID:hg_131922.1
Species:human
Chr:chr12
TSS Classification:no
Start:65881570
End:65881588
Strand:-
TSS Score:1
Start of the center position in the TSS region:65881579
End of the center position in the TSS region:65881580



Gene and protein annotation


Transcript_name:ENST00000536648.5 ENST00000504038.2 AY387665
Distance:0
GeneID:100129940
HGNC/MGI_ID:HGNC:53973
UniProt_ID:
Gene_name:HMGA2 antisense RNA 1
Gene_symbol:HMGA2-AS1
Gene_synonyms:RP11-366L20.2
Gene_source:HGNC:53973



Transcript annotation


Transcript_name:ENST00000536648.5 ENST00000504038.2 AY387665
Distance:0
Num_trans:100129940
All_trans:HGNC:53973



TATA-Box annotation


Distance to TSS:-1
Nearest PromoterID:NR_120478
Entrez ID:100129940
Nearest Unigene:Hs.685856
Nearest Refseq:NR_120478
Nearest Ensembl:ENSG00000197301
Gene Name:HMGA2 antisense RNA 1
Gene Alias:-
Gene Description:HMGA2 antisense RNA 1
Gene Type:ncRNA
CpG%:0.005
GC%:0.472637
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):