Difference between revisions of "TSS:Hg 131922.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000536648.5:0 ENST00000504038.2:0 NR_120478:0 uc001sta.1:0 uc058qmi.1:0 AY387666:0 AY387665:0 ENST00000356215.5:-453 uc001ssz.2:-453 AK128707:-453...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:53973 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-1 | |distance_to_tss=-1 | ||
|end=65881588 | |end=65881588 | ||
| + | |end_of_center_position=65881580 | ||
|entrez_id=100129940 | |entrez_id=100129940 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=HMGA2 antisense RNA 1 |
|gene_id=100129940 | |gene_id=100129940 | ||
| − | |gene_name= | + | |gene_name=HMGA2 antisense RNA 1 |
| − | |gene_source= | + | |gene_source=HGNC:53973 |
| − | |gene_symbol= | + | |gene_symbol=HMGA2-AS1 |
| − | |gene_synonyms= | + | |gene_synonyms=RP11-366L20.2 |
| − | |gene_type= | + | |gene_type=ncRNA |
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:53973 |
|nearest_ensembl=ENSG00000197301 | |nearest_ensembl=ENSG00000197301 | ||
|nearest_promoter_id=NR_120478 | |nearest_promoter_id=NR_120478 | ||
| − | |nearest_refseq= | + | |nearest_refseq=NR_120478 |
|nearest_unigene=Hs.685856 | |nearest_unigene=Hs.685856 | ||
| − | |num_trans= | + | |num_trans=100129940 |
|species=human | |species=human | ||
|start=65881570 | |start=65881570 | ||
| + | |start_of_center_position=65881579 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000536648.5 ENST00000504038.2 | + | |transcript_name=ENST00000536648.5 ENST00000504038.2 AY387665 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_131922.1 | |tss_id=hg_131922.1 | ||
Latest revision as of 05:07, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 65881579 |
|---|---|
| End of the center position in the TSS region: | 65881580 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000536648.5 ENST00000504038.2 AY387665 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100129940 |
| All_trans: | HGNC:53973 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NR_120478 |
| Entrez ID: | 100129940 |
| Nearest Unigene: | Hs.685856 |
| Nearest Refseq: | NR_120478 |
| Nearest Ensembl: | ENSG00000197301 |
| Gene Name: | HMGA2 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | HMGA2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
