Difference between revisions of "TSS:Hg 154765.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AB527800:12 EU832319:13 EU832404:13 KJ904433:13 X63629:-32 AK225396:-49 AK312554:-56 ENST00000542274.5:-58 uc059whp.1:-58 AK296968:-58 ENST00000566808.2...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |HJMD= |
| + | |PCAD= | ||
| + | |all_trans=HGNC:1762 | ||
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=12 | |distance=12 | ||
| − | |distance_to_tss= | + | |distance_to_tss=52 |
|end=68645365 | |end=68645365 | ||
| + | |end_of_center_position=68645362 | ||
|entrez_id=1001 | |entrez_id=1001 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=CDHP | + | |gene_alias=CDHP{{!}}HJMD{{!}}PCAD |
|gene_description=cadherin 3 | |gene_description=cadherin 3 | ||
|gene_id=1001 | |gene_id=1001 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=HGNC:1762 | |hgnc_mgi_id=HGNC:1762 | ||
|nearest_ensembl=ENSG00000062038 | |nearest_ensembl=ENSG00000062038 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001793 |
|nearest_refseq=NM_001793 | |nearest_refseq=NM_001793 | ||
|nearest_unigene=Hs.191842 | |nearest_unigene=Hs.191842 | ||
| − | |num_trans= | + | |num_trans=1001 |
|species=human | |species=human | ||
|start=68645358 | |start=68645358 | ||
| + | |start_of_center_position=68645361 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AB527800 | |transcript_name=AB527800 | ||
Latest revision as of 13:24, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68645361 |
|---|---|
| End of the center position in the TSS region: | 68645362 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB527800 |
|---|---|
| Distance: | 12 |
| Num_trans: | 1001 |
| All_trans: | HGNC:1762 |
TATA-Box annotation
| Distance to TSS: | 52 |
|---|---|
| Nearest PromoterID: | NM_001793 |
| Entrez ID: | 1001 |
| Nearest Unigene: | Hs.191842 |
| Nearest Refseq: | NM_001793 |
| Nearest Ensembl: | ENSG00000062038 |
| Gene Name: | cadherin 3 |
| Gene Alias: | CDHP|HJMD|PCAD |
| Gene Description: | cadherin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
