Difference between revisions of "TSS:Hg 154907.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:48605 | ||
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=-218 |
| − | |distance_to_tss= | + | |distance_to_tss=6235 |
|end=70761334 | |end=70761334 | ||
|end_of_center_position=70761330 | |end_of_center_position=70761330 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=VAC14 antisense RNA 1 | |gene_description=VAC14 antisense RNA 1 | ||
| − | |gene_name=VAC14-AS1 | + | |gene_id=100130894 |
| + | |gene_name=VAC14 antisense RNA 1 | ||
| + | |gene_source=HGNC:48605 | ||
| + | |gene_symbol=VAC14-AS1 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:48605 | ||
|nearest_ensembl=ENSG00000214353 | |nearest_ensembl=ENSG00000214353 | ||
|nearest_promoter_id=NR_034083 | |nearest_promoter_id=NR_034083 | ||
|nearest_refseq=NR_034083 | |nearest_refseq=NR_034083 | ||
|nearest_unigene=Hs.678899 | |nearest_unigene=Hs.678899 | ||
| − | |num_trans= | + | |num_trans=100130894 |
|species=human | |species=human | ||
|start=70761325 | |start=70761325 | ||
|start_of_center_position=70761329 | |start_of_center_position=70761329 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000662383.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_154907.1 | |tss_id=hg_154907.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 13:27, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 70761329 |
|---|---|
| End of the center position in the TSS region: | 70761330 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000662383.1 |
|---|---|
| Distance: | -218 |
| Num_trans: | 100130894 |
| All_trans: | HGNC:48605 |
TATA-Box annotation
| Distance to TSS: | 6235 |
|---|---|
| Nearest PromoterID: | NR_034083 |
| Entrez ID: | 100130894 |
| Nearest Unigene: | Hs.678899 |
| Nearest Refseq: | NR_034083 |
| Nearest Ensembl: | ENSG00000214353 |
| Gene Name: | VAC14 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | VAC14 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
