Personal tools

Difference between revisions of "TSS:Hg 155068.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=BC035731:0 ENST00000568925.1:104 uc059xiw.1:104 ENST00000563157.1:289 uc059xix.1:289 |chr=chr16 |cpg_percent=0.1 |distance=0 |distance_to_tss=12826 |end...")
 
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=BC035731:0 ENST00000568925.1:104 uc059xiw.1:104 ENST00000563157.1:289 uc059xix.1:289
+
|all_trans=HGNC:37236
 
|chr=chr16
 
|chr=chr16
 
|cpg_percent=0.1
 
|cpg_percent=0.1
 
|distance=0
 
|distance=0
|distance_to_tss=12826
+
|distance_to_tss=12870
 
|end=77212304
 
|end=77212304
 +
|end_of_center_position=77212278
 
|entrez_id=100130958
 
|entrez_id=100130958
 
|gc_percent=0.746269
 
|gc_percent=0.746269
Line 21: Line 22:
 
|nearest_refseq=NM_001129979
 
|nearest_refseq=NM_001129979
 
|nearest_unigene=Hs.734779
 
|nearest_unigene=Hs.734779
|num_trans=5
+
|num_trans=100130958
 
|species=human
 
|species=human
 
|start=77212251
 
|start=77212251
 +
|start_of_center_position=77212277
 
|strand=+
 
|strand=+
 
|transcript_name=BC035731
 
|transcript_name=BC035731

Latest revision as of 13:31, 20 July 2021

Basic information about the TSS


TSS ID:hg_155068.1
Species:human
Chr:chr16
TSS Classification:yes
Start:77212251
End:77212304
Strand:+
TSS Score:1
Start of the center position in the TSS region:77212277
End of the center position in the TSS region:77212278



Gene and protein annotation


Transcript_name:BC035731
Distance:0
GeneID:100130958
HGNC/MGI_ID:HGNC:37236
UniProt_ID:
Gene_name:synaptonemal complex central element protein 1 like
Gene_symbol:SYCE1L
Gene_synonyms:MRP2
Gene_source:HGNC:37236



Transcript annotation


Transcript_name:BC035731
Distance:0
Num_trans:100130958
All_trans:HGNC:37236



TATA-Box annotation


Distance to TSS:12870
Nearest PromoterID:NM_001129979
Entrez ID:100130958
Nearest Unigene:Hs.734779
Nearest Refseq:NM_001129979
Nearest Ensembl:ENSG00000205078
Gene Name:synaptonemal complex central element protein 1 like
Gene Alias:MRP2
Gene Description:synaptonemal complex central element protein 1 like
Gene Type:protein-coding
CpG%:0.1
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):