Difference between revisions of "TSS:Hg 155643.1"
From referenceTSS
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| Line 4: | Line 4: | ||
|ZFP276= | |ZFP276= | ||
|ZNF477= | |ZNF477= | ||
| − | |all_trans= | + | |all_trans=HGNC:48915 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 13: | Line 13: | ||
|entrez_id=92822 | |entrez_id=92822 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=CENP-Z | + | |gene_alias=CENP-Z{{!}}CENPZ{{!}}ZADT{{!}}ZFP276{{!}}ZNF477 |
|gene_description=zinc finger protein 276 | |gene_description=zinc finger protein 276 | ||
|gene_id=100128881 | |gene_id=100128881 | ||
| Line 19: | Line 19: | ||
|gene_source=HGNC:48915 | |gene_source=HGNC:48915 | ||
|gene_symbol=VPS9D1-AS1 | |gene_symbol=VPS9D1-AS1 | ||
| − | |gene_synonyms= | + | |gene_synonyms=MYU |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:48915 | |hgnc_mgi_id=HGNC:48915 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_152287 | |nearest_refseq=NM_152287 | ||
|nearest_unigene=Hs.290154 | |nearest_unigene=Hs.290154 | ||
| − | |num_trans= | + | |num_trans=100128881 |
|species=human | |species=human | ||
|start=89716802 | |start=89716802 | ||
|start_of_center_position=89716804 | |start_of_center_position=89716804 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000562298 | + | |transcript_name=ENST00000562298.1 BC061904 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_155643.1 | |tss_id=hg_155643.1 | ||
Latest revision as of 13:44, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 89716804 |
|---|---|
| End of the center position in the TSS region: | 89716805 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000562298.1 BC061904 |
|---|---|
| Distance: | -275 |
| Num_trans: | 100128881 |
| All_trans: | HGNC:48915 |
TATA-Box annotation
| Distance to TSS: | -3564 |
|---|---|
| Nearest PromoterID: | NR_110128 |
| Entrez ID: | 92822 |
| Nearest Unigene: | Hs.290154 |
| Nearest Refseq: | NM_152287 |
| Nearest Ensembl: | ENSG00000158805 |
| Gene Name: | VPS9D1 antisense RNA 1 |
| Gene Alias: | CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 |
| Gene Description: | zinc finger protein 276 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
