Difference between revisions of "TSS:Hg 158188.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|RAP1= | |RAP1= | ||
| − | |all_trans= | + | |all_trans=HGNC:33345 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001351307 | |nearest_refseq=NM_001351307 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=100033411 |
|species=human | |species=human | ||
|start=75701459 | |start=75701459 | ||
| Line 29: | Line 29: | ||
|strand=- | |strand=- | ||
|tata_box=-65(AGCTATTTAAGA,-,0.00),-34(CCCTATATAAAG,-,0.00),-32(CTATATAAAGCC,+,0.00) | |tata_box=-65(AGCTATTTAAGA,-,0.00),-34(CCCTATATAAAG,-,0.00),-32(CTATATAAAGCC,+,0.00) | ||
| − | |transcript_name=ENST00000633875.4 | + | |transcript_name=ENST00000633875.4 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_158188.1 | |tss_id=hg_158188.1 | ||
Latest revision as of 14:39, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 75701461 |
|---|---|
| End of the center position in the TSS region: | 75701462 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000633875.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100033411 |
| All_trans: | HGNC:33345 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001351307 |
| Entrez ID: | 100033411 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001351307 |
| Nearest Ensembl: | ENSG00000282757 |
| Gene Name: | double homeobox B |
| Gene Alias: | - |
| Gene Description: | double homeobox B |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -65(AGCTATTTAAGA,-,0.00),-34(CCCTATATAAAG,-,0.00),-32(CTATATAAAGCC,+,0.00) |
