Difference between revisions of "TSS:Hg 159074.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Fbx39= | |Fbx39= | ||
| − | |all_trans= | + | |all_trans=HGNC:28565 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=4 |
|end=6776228 | |end=6776228 | ||
|end_of_center_position=6776219 | |end_of_center_position=6776219 | ||
|entrez_id=162517 | |entrez_id=162517 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=CT144 | + | |gene_alias=CT144{{!}}Fbx39 |
|gene_description=F-box protein 39 | |gene_description=F-box protein 39 | ||
|gene_id=162517 | |gene_id=162517 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_153230 | |nearest_refseq=NM_153230 | ||
|nearest_unigene=Hs.368364 | |nearest_unigene=Hs.368364 | ||
| − | |num_trans= | + | |num_trans=162517 |
|species=human | |species=human | ||
|start=6776209 | |start=6776209 | ||
|start_of_center_position=6776218 | |start_of_center_position=6776218 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000321535. | + | |transcript_name=ENST00000321535.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_159074.1 | |tss_id=hg_159074.1 | ||
Latest revision as of 14:59, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6776218 |
|---|---|
| End of the center position in the TSS region: | 6776219 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000321535.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 162517 |
| All_trans: | HGNC:28565 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_153230 |
| Entrez ID: | 162517 |
| Nearest Unigene: | Hs.368364 |
| Nearest Refseq: | NM_153230 |
| Nearest Ensembl: | ENSG00000177294 |
| Gene Name: | F-box protein 39 |
| Gene Alias: | CT144|Fbx39 |
| Gene Description: | F-box protein 39 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
