Difference between revisions of "TSS:Hg 162328.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000226021.4:0 uc002jfu.4:0 L07738:0 AK313852:0 BC113492:0 BC113486:0 BC069493:0 NM_000727:-27 HQ258641:40 KJ890809:40 KJ896532:40 |chr=chr17 |cpg_...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:1405 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=36 |
|end=67044617 | |end=67044617 | ||
| + | |end_of_center_position=67044590 | ||
|entrez_id=786 | |entrez_id=786 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_000727 | |nearest_refseq=NM_000727 | ||
|nearest_unigene=Hs.147989 | |nearest_unigene=Hs.147989 | ||
| − | |num_trans= | + | |num_trans=786 |
|species=human | |species=human | ||
|start=67044562 | |start=67044562 | ||
| + | |start_of_center_position=67044589 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=L07738 AK313852 BC113492 BC113486 BC069493 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_162328.1 | |tss_id=hg_162328.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 16:10, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 67044589 |
|---|---|
| End of the center position in the TSS region: | 67044590 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | L07738 AK313852 BC113492 BC113486 BC069493 |
|---|---|
| Distance: | 0 |
| Num_trans: | 786 |
| All_trans: | HGNC:1405 |
TATA-Box annotation
| Distance to TSS: | 36 |
|---|---|
| Nearest PromoterID: | NM_000727 |
| Entrez ID: | 786 |
| Nearest Unigene: | Hs.147989 |
| Nearest Refseq: | NM_000727 |
| Nearest Ensembl: | ENSG00000108878 |
| Gene Name: | calcium voltage-gated channel auxiliary subunit gamma 1 |
| Gene Alias: | CACNLG |
| Gene Description: | calcium voltage-gated channel auxiliary subunit gamma 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
