Difference between revisions of "TSS:Hg 162331.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AF086300:-280 |chr=chr17 |cpg_percent=0.03 |distance=-280 |distance_to_tss=11828 |end=67056375 |entrez_id=786 |gc_percent=0.631841 |gene_alias=CACNLG |g...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:1405 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=-280 | |distance=-280 | ||
| − | |distance_to_tss= | + | |distance_to_tss=11810 |
|end=67056375 | |end=67056375 | ||
| + | |end_of_center_position=67056365 | ||
|entrez_id=786 | |entrez_id=786 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_000727 | |nearest_refseq=NM_000727 | ||
|nearest_unigene=Hs.147989 | |nearest_unigene=Hs.147989 | ||
| − | |num_trans= | + | |num_trans=786 |
|species=human | |species=human | ||
|start=67056353 | |start=67056353 | ||
| + | |start_of_center_position=67056364 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AF086300 | |transcript_name=AF086300 | ||
Latest revision as of 16:10, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 67056364 |
|---|---|
| End of the center position in the TSS region: | 67056365 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AF086300 |
|---|---|
| Distance: | -280 |
| Num_trans: | 786 |
| All_trans: | HGNC:1405 |
TATA-Box annotation
| Distance to TSS: | 11810 |
|---|---|
| Nearest PromoterID: | NM_000727 |
| Entrez ID: | 786 |
| Nearest Unigene: | Hs.147989 |
| Nearest Refseq: | NM_000727 |
| Nearest Ensembl: | ENSG00000108878 |
| Gene Name: | calcium voltage-gated channel auxiliary subunit gamma 1 |
| Gene Alias: | CACNLG |
| Gene Description: | calcium voltage-gated channel auxiliary subunit gamma 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
