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Difference between revisions of "TSS:Hg 162767.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK131023:0 NM_001162997:-67 BC062771:-67 ENST00000579469.1:-196 uc002joy.4:-196 ENST00000556126.2:-390 uc060kah.1:-390
+
|all_trans=HGNC:40032
 
|chr=chr17
 
|chr=chr17
 
|cpg_percent=0.02
 
|cpg_percent=0.02
 
|distance=0
 
|distance=0
|distance_to_tss=77
+
|distance_to_tss=392
 
|end=75646653
 
|end=75646653
 
|end_of_center_position=75646643
 
|end_of_center_position=75646643
 
|entrez_id=100130933
 
|entrez_id=100130933
 
|gc_percent=0.58209
 
|gc_percent=0.58209
|gene_alias=C17orf110
+
|gene_alias=C17orf110{{!}}ELN
 
|gene_description=small integral membrane protein 6
 
|gene_description=small integral membrane protein 6
 
|gene_id=100130933
 
|gene_id=100130933
Line 15: Line 15:
 
|gene_source=HGNC:40032
 
|gene_source=HGNC:40032
 
|gene_symbol=SMIM6
 
|gene_symbol=SMIM6
|gene_synonyms=
+
|gene_synonyms=ELN
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 
|hgnc_mgi_id=HGNC:40032
 
|hgnc_mgi_id=HGNC:40032
Line 22: Line 22:
 
|nearest_refseq=NM_001162997
 
|nearest_refseq=NM_001162997
 
|nearest_unigene=Hs.662541
 
|nearest_unigene=Hs.662541
|num_trans=7
+
|num_trans=100130933
 
|species=human
 
|species=human
 
|start=75646632
 
|start=75646632

Latest revision as of 16:19, 20 July 2021

Basic information about the TSS


TSS ID:hg_162767.1
Species:human
Chr:chr17
TSS Classification:no
Start:75646632
End:75646653
Strand:+
TSS Score:1
Start of the center position in the TSS region:75646642
End of the center position in the TSS region:75646643



Gene and protein annotation


Transcript_name:AK131023
Distance:0
GeneID:100130933
HGNC/MGI_ID:HGNC:40032
UniProt_ID:
Gene_name:small integral membrane protein 6
Gene_symbol:SMIM6
Gene_synonyms:ELN
Gene_source:HGNC:40032



Transcript annotation


Transcript_name:AK131023
Distance:0
Num_trans:100130933
All_trans:HGNC:40032



TATA-Box annotation


Distance to TSS:392
Nearest PromoterID:NM_001162997
Entrez ID:100130933
Nearest Unigene:Hs.662541
Nearest Refseq:NM_001162997
Nearest Ensembl:ENSG00000259120
Gene Name:small integral membrane protein 6
Gene Alias:C17orf110|ELN
Gene Description:small integral membrane protein 6
Gene Type:protein-coding
CpG%:0.02
GC%:0.58209
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):