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Difference between revisions of "TSS:Hg 16398.1"

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Line 2: Line 2:
 
|DBCCR1L1=
 
|DBCCR1L1=
 
|FAM5C=
 
|FAM5C=
|all_trans=AK123024:-24 AB111893:-81 ENST00000367462.5:-316 NM_199051:-316
+
|all_trans=HGNC:22393
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.005
 
|cpg_percent=0.005
Line 24: Line 24:
 
|nearest_refseq=NM_199051
 
|nearest_refseq=NM_199051
 
|nearest_unigene=Hs.65765
 
|nearest_unigene=Hs.65765
|num_trans=4
+
|num_trans=339479
 
|species=human
 
|species=human
 
|start=190477532
 
|start=190477532

Latest revision as of 16:46, 20 July 2021

Basic information about the TSS


TSS ID:hg_16398.1
Species:human
Chr:chr1
TSS Classification:yes
Start:190477532
End:190477548
Strand:-
TSS Score:1
Start of the center position in the TSS region:190477540
End of the center position in the TSS region:190477541



Gene and protein annotation


Transcript_name:AK123024
Distance:-24
GeneID:339479
HGNC/MGI_ID:HGNC:22393
UniProt_ID:
Gene_name:BMP/retinoic acid inducible neural specific 3
Gene_symbol:BRINP3
Gene_synonyms:DBCCR1L DBCCR1L1
Gene_source:HGNC:22393



Transcript annotation


Transcript_name:AK123024
Distance:-24
Num_trans:339479
All_trans:HGNC:22393



TATA-Box annotation


Distance to TSS:324
Nearest PromoterID:NM_199051
Entrez ID:339479
Nearest Unigene:Hs.65765
Nearest Refseq:NM_199051
Nearest Ensembl:ENSG00000162670
Gene Name:BMP/retinoic acid inducible neural specific 3
Gene Alias:DBCCR1L|DBCCR1L1|FAM5C
Gene Description:BMP/retinoic acid inducible neural specific 3
Gene Type:protein-coding
CpG%:0.005
GC%:0.40796
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):