Difference between revisions of "TSS:Hg 166237.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NR_027412:-20 NR_027413:-20 ENST00000341011.11:311 uc010wib.2:311 BC035366:311 ENST00000586231.1:-321 uc060fto.1:-321 AK127427:-321 |chr=chr17 |cpg_perc...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NR_027412:-20 NR_027413:-20 ENST00000341011.11 | + | |all_trans=NR_027412:-20 NR_027413:-20 ENST00000665553.1:32 ENST00000664287.1:-281 ENST00000341011.11:311 BC035366:311 ENST00000586231.1:-321 AK127427:-321 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=31 | |distance_to_tss=31 | ||
|end=43388878 | |end=43388878 | ||
| + | |end_of_center_position=43388867 | ||
|entrez_id=100130581 | |entrez_id=100130581 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=43388855 | |start=43388855 | ||
| + | |start_of_center_position=43388866 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NR_027412 NR_027413 | + | |transcript_name=NR_027412.1 NR_027413.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_166237.1 | |tss_id=hg_166237.1 | ||
Latest revision as of 17:36, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 43388866 |
|---|---|
| End of the center position in the TSS region: | 43388867 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NR_027412.1 NR_027413.2 |
|---|---|
| Distance: | -20 |
| Num_trans: | 8 |
| All_trans: | NR_027412:-20 NR_027413:-20 ENST00000665553.1:32 ENST00000664287.1:-281 ENST00000341011.11:311 BC035366:311 ENST00000586231.1:-321 AK127427:-321 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NR_027412 |
| Entrez ID: | 100130581 |
| Nearest Unigene: | Hs.546897 |
| Nearest Refseq: | NR_027412 |
| Nearest Ensembl: | ENSG00000188825 |
| Gene Name: | long intergenic non-protein coding RNA 910 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 910 |
| Gene Type: | ncRNA |
| CpG%: | 0.065 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
