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Difference between revisions of "TSS:Hg 16794.1"

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Line 8: Line 8:
 
|YKL40=
 
|YKL40=
 
|YYL-40=
 
|YYL-40=
|all_trans=ENST00000404436.2:2 ENST00000472064.1:-22 BX648308:160
+
|all_trans=HGNC:1932
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 31: Line 31:
 
|nearest_refseq=NM_001276
 
|nearest_refseq=NM_001276
 
|nearest_unigene=Hs.382202
 
|nearest_unigene=Hs.382202
|num_trans=3
+
|num_trans=1116
 
|species=human
 
|species=human
 
|start=203182806
 
|start=203182806

Latest revision as of 18:13, 20 July 2021

Basic information about the TSS


TSS ID:hg_16794.1
Species:human
Chr:chr1
TSS Classification:yes
Start:203182806
End:203182819
Strand:-
TSS Score:1
Start of the center position in the TSS region:203182812
End of the center position in the TSS region:203182813



Gene and protein annotation


Transcript_name:ENST00000404436.2
Distance:2
GeneID:1116
HGNC/MGI_ID:HGNC:1932
UniProt_ID:H0Y3U8
Gene_name:chitinase 3 like 1
Gene_symbol:CHI3L1
Gene_synonyms:GP39 YK-40 YKL40
Gene_source:HGNC:1932



Transcript annotation


Transcript_name:ENST00000404436.2
Distance:2
Num_trans:1116
All_trans:HGNC:1932



TATA-Box annotation


Distance to TSS:3891
Nearest PromoterID:NM_001276
Entrez ID:1116
Nearest Unigene:Hs.382202
Nearest Refseq:NM_001276
Nearest Ensembl:ENSG00000133048
Gene Name:chitinase 3 like 1
Gene Alias:ASRT7|CGP-39|GP-39|GP39|HC-gp39|HCGP-3P|YK-40|YKL-40|YKL40|YYL-40|hCGP-39
Gene Description:chitinase 3 like 1
Gene Type:protein-coding
CpG%:0.015
GC%:0.537313
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):