Difference between revisions of "TSS:Hg 16808.1"
From referenceTSS
| Line 8: | Line 8: | ||
|YKL40= | |YKL40= | ||
|YYL-40= | |YYL-40= | ||
| − | |all_trans= | + | |all_trans=HGNC:1932 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 31: | Line 31: | ||
|nearest_refseq=NM_001276 | |nearest_refseq=NM_001276 | ||
|nearest_unigene=Hs.382202 | |nearest_unigene=Hs.382202 | ||
| − | |num_trans= | + | |num_trans=1116 |
|species=human | |species=human | ||
|start=203186695 | |start=203186695 | ||
| Line 37: | Line 37: | ||
|strand=- | |strand=- | ||
|tata_box=-78(TCCCATAAAAGG,-,0.00),-76(CCATAAAAGGGC,+,0.00),-33(AGGTATATAAAG,-,0.00) | |tata_box=-78(TCCCATAAAAGG,-,0.00),-76(CCATAAAAGGGC,+,0.00),-33(AGGTATATAAAG,-,0.00) | ||
| − | |transcript_name=ENST00000255409.8 | + | |transcript_name=ENST00000255409.8 AK225266 AK130142 AK225584 AK130200 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_16808.1 | |tss_id=hg_16808.1 | ||
Latest revision as of 18:16, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 203186702 |
|---|---|
| End of the center position in the TSS region: | 203186703 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000255409.8 AK225266 AK130142 AK225584 AK130200 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1116 |
| All_trans: | HGNC:1932 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001276 |
| Entrez ID: | 1116 |
| Nearest Unigene: | Hs.382202 |
| Nearest Refseq: | NM_001276 |
| Nearest Ensembl: | ENSG00000133048 |
| Gene Name: | chitinase 3 like 1 |
| Gene Alias: | ASRT7|CGP-39|GP-39|GP39|HC-gp39|HCGP-3P|YK-40|YKL-40|YKL40|YYL-40|hCGP-39 |
| Gene Description: | chitinase 3 like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -78(TCCCATAAAAGG,-,0.00),-76(CCATAAAAGGGC,+,0.00),-33(AGGTATATAAAG,-,0.00) |
