Difference between revisions of "TSS:Hg 168690.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000577027.1:177 uc060lir.1:177 |chr=chr17 |cpg_percent=0.045 |distance=177 |distance_to_tss=974 |end=81329707 |entrez_id=284186 |gc_percent=0.6915...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:26794 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=177 | |distance=177 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-20452 |
|end=81329707 | |end=81329707 | ||
| − | |entrez_id= | + | |end_of_center_position=81329701 |
| + | |entrez_id=284185 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias= | + | |gene_alias=C17orf55 |
| − | |gene_description= | + | |gene_description=long intergenic non-protein coding RNA 482 |
|gene_id=284186 | |gene_id=284186 | ||
| − | |gene_name= | + | |gene_name=TMEM105 long non-coding RNA |
|gene_source=HGNC:26794 | |gene_source=HGNC:26794 | ||
|gene_symbol=TMEM105 | |gene_symbol=TMEM105 | ||
|gene_synonyms=FLJ38792 | |gene_synonyms=FLJ38792 | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|hgnc_mgi_id=HGNC:26794 | |hgnc_mgi_id=HGNC:26794 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_038080 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_178519 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.631762 |
| − | |num_trans= | + | |num_trans=284186 |
|species=human | |species=human | ||
|start=81329693 | |start=81329693 | ||
| + | |start_of_center_position=81329700 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000577027 | + | |transcript_name=ENST00000577027.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_168690.1 | |tss_id=hg_168690.1 | ||
Latest revision as of 18:30, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 81329700 |
|---|---|
| End of the center position in the TSS region: | 81329701 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000577027.1 |
|---|---|
| Distance: | 177 |
| Num_trans: | 284186 |
| All_trans: | HGNC:26794 |
TATA-Box annotation
| Distance to TSS: | -20452 |
|---|---|
| Nearest PromoterID: | NR_038080 |
| Entrez ID: | 284185 |
| Nearest Unigene: | Hs.631762 |
| Nearest Refseq: | NM_178519 |
| Nearest Ensembl: | |
| Gene Name: | TMEM105 long non-coding RNA |
| Gene Alias: | C17orf55 |
| Gene Description: | long intergenic non-protein coding RNA 482 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
