Difference between revisions of "TSS:Hg 169094.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:241 |
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=-121 | |distance=-121 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2311 |
|end=907683 | |end=907683 | ||
| + | |end_of_center_position=907678 | ||
|entrez_id=116 | |entrez_id=116 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| Line 11: | Line 12: | ||
|gene_description=adenylate cyclase activating polypeptide 1 | |gene_description=adenylate cyclase activating polypeptide 1 | ||
|gene_id=116 | |gene_id=116 | ||
| − | |gene_name=adenylate cyclase activating polypeptide 1 | + | |gene_name=adenylate cyclase activating polypeptide 1 |
|gene_source=HGNC:241 | |gene_source=HGNC:241 | ||
|gene_symbol=ADCYAP1 | |gene_symbol=ADCYAP1 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001117 | |nearest_refseq=NM_001117 | ||
|nearest_unigene=Hs.531719 | |nearest_unigene=Hs.531719 | ||
| − | |num_trans= | + | |num_trans=116 |
|species=human | |species=human | ||
|start=907671 | |start=907671 | ||
| + | |start_of_center_position=907677 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000269200.5 | + | |transcript_name=ENST00000269200.5 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_169094.1 | |tss_id=hg_169094.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:38, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 907677 |
|---|---|
| End of the center position in the TSS region: | 907678 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000269200.5 |
|---|---|
| Distance: | -121 |
| Num_trans: | 116 |
| All_trans: | HGNC:241 |
TATA-Box annotation
| Distance to TSS: | 2311 |
|---|---|
| Nearest PromoterID: | NM_001117 |
| Entrez ID: | 116 |
| Nearest Unigene: | Hs.531719 |
| Nearest Refseq: | NM_001117 |
| Nearest Ensembl: | ENSG00000141433 |
| Gene Name: | adenylate cyclase activating polypeptide 1 |
| Gene Alias: | PACAP |
| Gene Description: | adenylate cyclase activating polypeptide 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
