Difference between revisions of "TSS:Hg 169193.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TGIF= | |TGIF= | ||
| − | |all_trans= | + | |all_trans=HGNC:11776 |
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_003244 | |nearest_refseq=NM_003244 | ||
|nearest_unigene=Hs.373550 | |nearest_unigene=Hs.373550 | ||
| − | |num_trans= | + | |num_trans=7050 |
|species=human | |species=human | ||
|start=3452135 | |start=3452135 | ||
| Line 29: | Line 29: | ||
|strand=+ | |strand=+ | ||
|tata_box=-32(GCTTTTCTGGCG,+,0.00) | |tata_box=-32(GCTTTTCTGGCG,+,0.00) | ||
| − | |transcript_name=CU689140 | + | |transcript_name=CU689140 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_169193.1 | |tss_id=hg_169193.1 | ||
Latest revision as of 18:40, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 3452143 |
|---|---|
| End of the center position in the TSS region: | 3452144 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | CU689140 |
|---|---|
| Distance: | -156 |
| Num_trans: | 7050 |
| All_trans: | HGNC:11776 |
TATA-Box annotation
| Distance to TSS: | 551 |
|---|---|
| Nearest PromoterID: | NM_173210 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4|TGIF |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(GCTTTTCTGGCG,+,0.00) |
