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Difference between revisions of "TSS:Hg 171333.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000579431.2:98 ENST00000649729.1:106 ENST00000584201.1:173 ENST00000583490.1:-410 NR_102763:-410 AK123079:-410
+
|all_trans=HGNC:48840
 
|chr=chr18
 
|chr=chr18
 
|cpg_percent=0.06
 
|cpg_percent=0.06
Line 23: Line 23:
 
|nearest_refseq=NR_102763
 
|nearest_refseq=NR_102763
 
|nearest_unigene=Hs.514745
 
|nearest_unigene=Hs.514745
|num_trans=6
+
|num_trans=100128893
 
|species=human
 
|species=human
 
|start=22168542
 
|start=22168542

Latest revision as of 19:26, 20 July 2021

Basic information about the TSS


TSS ID:hg_171333.1
Species:human
Chr:chr18
TSS Classification:yes
Start:22168542
End:22168558
Strand:-
TSS Score:1
Start of the center position in the TSS region:22168550
End of the center position in the TSS region:22168551



Gene and protein annotation


Transcript_name:ENST00000579431.2
Distance:98
GeneID:100128893
HGNC/MGI_ID:HGNC:48840
UniProt_ID:
Gene_name:GATA6 antisense RNA 1 (head to head)
Gene_symbol:GATA6-AS1
Gene_synonyms:BM742401 locus5689
Gene_source:HGNC:48840



Transcript annotation


Transcript_name:ENST00000579431.2
Distance:98
Num_trans:100128893
All_trans:HGNC:48840



TATA-Box annotation


Distance to TSS:418
Nearest PromoterID:NR_102763
Entrez ID:100128893
Nearest Unigene:Hs.514745
Nearest Refseq:NR_102763
Nearest Ensembl:ENSG00000266010
Gene Name:GATA6 antisense RNA 1 (head to head)
Gene Alias:BM742401|locus5689
Gene Description:GATA6 antisense RNA 1 (head to head)
Gene Type:ncRNA
CpG%:0.06
GC%:0.562189
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):