Difference between revisions of "TSS:Hg 171622.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000588355.1:-54 uc060ojl.1:-54 ENST00000590846.1:-96 uc060ojk.1:-96 |chr=chr18 |cpg_percent=0.09 |distance=-54 |distance_to_tss=-1290 |end=3422485...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |HRIHFB2255= |
| + | |NOLP= | ||
| + | |all_trans=HGNC:7870 | ||
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-1290 | |distance_to_tss=-1290 | ||
|end=34224856 | |end=34224856 | ||
| + | |end_of_center_position=34224841 | ||
|entrez_id=8715 | |entrez_id=8715 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=CT125 | + | |gene_alias=CT125{{!}}HRIHFB2255{{!}}NOLP |
|gene_description=nucleolar protein 4 | |gene_description=nucleolar protein 4 | ||
|gene_id=8715 | |gene_id=8715 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=HGNC:7870 | |hgnc_mgi_id=HGNC:7870 | ||
|nearest_ensembl=ENSG00000101746 | |nearest_ensembl=ENSG00000101746 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001353237 |
|nearest_refseq=NM_003787 | |nearest_refseq=NM_003787 | ||
|nearest_unigene=Hs.514795 | |nearest_unigene=Hs.514795 | ||
| − | |num_trans= | + | |num_trans=8715 |
|species=human | |species=human | ||
|start=34224825 | |start=34224825 | ||
| + | |start_of_center_position=34224840 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000588355 | + | |transcript_name=ENST00000588355.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_171622.1 | |tss_id=hg_171622.1 | ||
Latest revision as of 19:33, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34224840 |
|---|---|
| End of the center position in the TSS region: | 34224841 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000588355.1 |
|---|---|
| Distance: | -54 |
| Num_trans: | 8715 |
| All_trans: | HGNC:7870 |
TATA-Box annotation
| Distance to TSS: | -1290 |
|---|---|
| Nearest PromoterID: | NM_001353237 |
| Entrez ID: | 8715 |
| Nearest Unigene: | Hs.514795 |
| Nearest Refseq: | NM_003787 |
| Nearest Ensembl: | ENSG00000101746 |
| Gene Name: | nucleolar protein 4 |
| Gene Alias: | CT125|HRIHFB2255|NOLP |
| Gene Description: | nucleolar protein 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
