Difference between revisions of "TSS:Hg 171625.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000588355.1:0 uc060ojl.1:0 ENST00000590846.1:-16 uc060ojk.1:-16 |chr=chr18 |cpg_percent=0.075 |distance=0 |distance_to_tss=-1367 |end=34224936 |en...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |HRIHFB2255= |
| + | |NOLP= | ||
| + | |all_trans=HGNC:7870 | ||
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-1367 | |distance_to_tss=-1367 | ||
|end=34224936 | |end=34224936 | ||
| + | |end_of_center_position=34224919 | ||
|entrez_id=8715 | |entrez_id=8715 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=CT125 | + | |gene_alias=CT125{{!}}HRIHFB2255{{!}}NOLP |
|gene_description=nucleolar protein 4 | |gene_description=nucleolar protein 4 | ||
|gene_id=8715 | |gene_id=8715 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=HGNC:7870 | |hgnc_mgi_id=HGNC:7870 | ||
|nearest_ensembl=ENSG00000101746 | |nearest_ensembl=ENSG00000101746 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001353237 |
|nearest_refseq=NM_003787 | |nearest_refseq=NM_003787 | ||
|nearest_unigene=Hs.514795 | |nearest_unigene=Hs.514795 | ||
| − | |num_trans= | + | |num_trans=8715 |
|species=human | |species=human | ||
|start=34224900 | |start=34224900 | ||
| + | |start_of_center_position=34224918 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000588355 | + | |transcript_name=ENST00000261592.10 ENST00000588355.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_171625.1 | |tss_id=hg_171625.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=O94818 |
}} | }} | ||
Latest revision as of 19:33, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 34224918 |
|---|---|
| End of the center position in the TSS region: | 34224919 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000261592.10 ENST00000588355.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8715 |
| All_trans: | HGNC:7870 |
TATA-Box annotation
| Distance to TSS: | -1367 |
|---|---|
| Nearest PromoterID: | NM_001353237 |
| Entrez ID: | 8715 |
| Nearest Unigene: | Hs.514795 |
| Nearest Refseq: | NM_003787 |
| Nearest Ensembl: | ENSG00000101746 |
| Gene Name: | nucleolar protein 4 |
| Gene Alias: | CT125|HRIHFB2255|NOLP |
| Gene Description: | nucleolar protein 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
