Difference between revisions of "TSS:Hg 173209.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001135580:-12 ENST00000329493.5:-15 uc010xhm.3:-15 |chr=chr19 |cpg_percent=0.04 |distance=-12 |distance_to_tss=17 |end=3539179 |entrez_id=100128569 |...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_001135580:-12 ENST00000329493.5 | + | |all_trans=NM_001135580:-12 ENST00000329493.5:-15 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=17 | |distance_to_tss=17 | ||
|end=3539179 | |end=3539179 | ||
| + | |end_of_center_position=3539174 | ||
|entrez_id=100128569 | |entrez_id=100128569 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001135580 | |nearest_refseq=NM_001135580 | ||
|nearest_unigene=Hs.664978 | |nearest_unigene=Hs.664978 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=3539168 | |start=3539168 | ||
| + | |start_of_center_position=3539173 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_001135580 | + | |transcript_name=NM_001135580.2 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_173209.1 | |tss_id=hg_173209.1 | ||
Latest revision as of 20:07, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3539173 |
|---|---|
| End of the center position in the TSS region: | 3539174 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001135580.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | NM_001135580:-12 ENST00000329493.5:-15 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NM_001135580 |
| Entrez ID: | 100128569 |
| Nearest Unigene: | Hs.664978 |
| Nearest Refseq: | NM_001135580 |
| Nearest Ensembl: | ENSG00000183397 |
| Gene Name: | chromosome 19 open reading frame 71 |
| Gene Alias: | - |
| Gene Description: | chromosome 19 open reading frame 71 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
