Difference between revisions of "TSS:Hg 180645.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=KJ893505:14 CU680510:14 AK289509:-256 AK090732:-273 ENST00000593074.5:-288 NM_001199570:-288 uc010eeq.3:-288 AK294748:-385 BC013116:-424 ENST00000592017...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |CLIPR59= |
| + | |RSNL1= | ||
| + | |all_trans=HGNC:24314 | ||
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=14 | |distance=14 | ||
| − | |distance_to_tss= | + | |distance_to_tss=258 |
|end=36032383 | |end=36032383 | ||
| + | |end_of_center_position=36032378 | ||
|entrez_id=25999 | |entrez_id=25999 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=CLIPR-59 | + | |gene_alias=CLIPR-59{{!}}CLIPR59{{!}}RSNL1 |
|gene_description=CAP-Gly domain containing linker protein 3 | |gene_description=CAP-Gly domain containing linker protein 3 | ||
|gene_id=25999 | |gene_id=25999 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_015526 | |nearest_refseq=NM_015526 | ||
|nearest_unigene=Hs.466539 | |nearest_unigene=Hs.466539 | ||
| − | |num_trans= | + | |num_trans=25999 |
|species=human | |species=human | ||
|start=36032371 | |start=36032371 | ||
| + | |start_of_center_position=36032377 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=CU680510 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_180645.1 | |tss_id=hg_180645.1 | ||
Latest revision as of 22:50, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 36032377 |
|---|---|
| End of the center position in the TSS region: | 36032378 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | CU680510 |
|---|---|
| Distance: | 14 |
| Num_trans: | 25999 |
| All_trans: | HGNC:24314 |
TATA-Box annotation
| Distance to TSS: | 258 |
|---|---|
| Nearest PromoterID: | NM_001199570 |
| Entrez ID: | 25999 |
| Nearest Unigene: | Hs.466539 |
| Nearest Refseq: | NM_015526 |
| Nearest Ensembl: | ENSG00000105270 |
| Gene Name: | CAP-Gly domain containing linker protein 3 |
| Gene Alias: | CLIPR-59|CLIPR59|RSNL1 |
| Gene Description: | CAP-Gly domain containing linker protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
