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Difference between revisions of "TSS:Hg 19888.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000627210.2:0 ENST00000631330.2:0 uc061iml.1:0 uc061imm.1:0 ENST00000627538.2:45 uc061imn.1:45 NR_038441:65 ENST00000630783.2:260 uc061imo.1:260 ENST00000626098.2:272 uc061imp.1:272 ENST00000630006.2:276 uc061imq.1:276
+
|all_trans=HGNC:44102
 
|chr=chr2
 
|chr=chr2
 
|cpg_percent=0
 
|cpg_percent=0
Line 22: Line 22:
 
|nearest_refseq=NR_038441
 
|nearest_refseq=NR_038441
 
|nearest_unigene=Hs.744988
 
|nearest_unigene=Hs.744988
|num_trans=13
+
|num_trans=100128590
 
|species=human
 
|species=human
 
|start=39917557
 
|start=39917557
 
|start_of_center_position=39917563
 
|start_of_center_position=39917563
 
|strand=+
 
|strand=+
|transcript_name=ENST00000627210.2 ENST00000631330.2 uc061iml.1 uc061imm.1
+
|transcript_name=ENST00000627210.2 ENST00000631330.2
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=hg_19888.1
 
|tss_id=hg_19888.1

Latest revision as of 05:25, 21 July 2021

Basic information about the TSS


TSS ID:hg_19888.1
Species:human
Chr:chr2
TSS Classification:no
Start:39917557
End:39917569
Strand:+
TSS Score:1
Start of the center position in the TSS region:39917563
End of the center position in the TSS region:39917564



Gene and protein annotation


Transcript_name:ENST00000627210.2 ENST00000631330.2
Distance:0
GeneID:100128590
HGNC/MGI_ID:HGNC:44102
UniProt_ID:
Gene_name:SLC8A1 antisense RNA 1
Gene_symbol:SLC8A1-AS1
Gene_synonyms:
Gene_source:HGNC:44102



Transcript annotation


Transcript_name:ENST00000627210.2 ENST00000631330.2
Distance:0
Num_trans:100128590
All_trans:HGNC:44102



TATA-Box annotation


Distance to TSS:-71
Nearest PromoterID:NR_038441
Entrez ID:100128590
Nearest Unigene:Hs.744988
Nearest Refseq:NR_038441
Nearest Ensembl:ENSG00000227028
Gene Name:SLC8A1 antisense RNA 1
Gene Alias:-
Gene Description:SLC8A1 antisense RNA 1
Gene Type:ncRNA
CpG%:0
GC%:0.472637
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):