Difference between revisions of "TSS:Hg 216969.1"
From referenceTSS
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|MCH6= | |MCH6= | ||
|PPP1R56= | |PPP1R56= | ||
| − | |all_trans=NM_032996:0 ENST00000375890.8 | + | |all_trans=NM_032996:0 ENST00000375890.8:64 AK303743:64 ENST00000447522.5:-99 ENST00000546424.5:345 NM_001278054:345 NR_102733:345 NR_102732:345 AB209147:345 ENST00000348549.9:443 BC006463:495 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 13: | Line 13: | ||
|entrez_id=842 | |entrez_id=842 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=APAF-3 | + | |gene_alias=APAF-3{{!}}APAF3{{!}}ICE-LAP6{{!}}MCH6{{!}}PPP1R56 |
|gene_description=caspase 9 | |gene_description=caspase 9 | ||
|gene_id=842 | |gene_id=842 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_001229 | |nearest_refseq=NM_001229 | ||
|nearest_unigene=Hs.329502 | |nearest_unigene=Hs.329502 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=15524789 | |start=15524789 | ||
|start_of_center_position=15524789 | |start_of_center_position=15524789 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_032996 | + | |transcript_name=NM_032996.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_216969.1 | |tss_id=hg_216969.1 | ||
Latest revision as of 06:52, 21 July 2021
Basic information about the TSS
|
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| Start of the center position in the TSS region: | 15524789 |
|---|---|
| End of the center position in the TSS region: | 15524790 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_032996.3 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | NM_032996:0 ENST00000375890.8:64 AK303743:64 ENST00000447522.5:-99 ENST00000546424.5:345 NM_001278054:345 NR_102733:345 NR_102732:345 AB209147:345 ENST00000348549.9:443 BC006463:495 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_032996 |
| Entrez ID: | 842 |
| Nearest Unigene: | Hs.329502 |
| Nearest Refseq: | NM_001229 |
| Nearest Ensembl: | ENSG00000132906 |
| Gene Name: | caspase 9 |
| Gene Alias: | APAF-3|APAF3|ICE-LAP6|MCH6|PPP1R56 |
| Gene Description: | caspase 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
