Difference between revisions of "TSS:Hg 219564.1"
From referenceTSS
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| Line 4: | Line 4: | ||
|NKGCD= | |NKGCD= | ||
|P1-CDC21= | |P1-CDC21= | ||
| − | |all_trans= | + | |all_trans=HGNC:6947 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| − | |distance=- | + | |distance=-71 |
| − | |distance_to_tss= | + | |distance_to_tss=-73 |
|end=47960256 | |end=47960256 | ||
|end_of_center_position=47960256 | |end_of_center_position=47960256 | ||
| − | |entrez_id= | + | |entrez_id=5591 |
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias= | + | |gene_alias=DNA-PKC{{!}}DNA-PKcs{{!}}DNAPK{{!}}DNAPKc{{!}}DNPK1{{!}}HYRC{{!}}HYRC1{{!}}IMD26{{!}}XRCC7{{!}}p350 |
| − | |gene_description= | + | |gene_description=protein kinase, DNA-activated, catalytic subunit |
|gene_id=4173 | |gene_id=4173 | ||
|gene_name=minichromosome maintenance complex component 4 | |gene_name=minichromosome maintenance complex component 4 | ||
| Line 23: | Line 23: | ||
|hCdc21= | |hCdc21= | ||
|hgnc_mgi_id=HGNC:6947 | |hgnc_mgi_id=HGNC:6947 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000253729 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_006904 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_006904 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.491682 |
| − | |num_trans= | + | |num_trans=4173 |
|species=human | |species=human | ||
|start=47960255 | |start=47960255 | ||
|start_of_center_position=47960255 | |start_of_center_position=47960255 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000518221.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_219564.1 | |tss_id=hg_219564.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=E5RFR3 |
}} | }} | ||
Latest revision as of 07:19, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 47960255 |
|---|---|
| End of the center position in the TSS region: | 47960256 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000518221.5 |
|---|---|
| Distance: | -71 |
| Num_trans: | 4173 |
| All_trans: | HGNC:6947 |
TATA-Box annotation
| Distance to TSS: | -73 |
|---|---|
| Nearest PromoterID: | NM_006904 |
| Entrez ID: | 5591 |
| Nearest Unigene: | Hs.491682 |
| Nearest Refseq: | NM_006904 |
| Nearest Ensembl: | ENSG00000253729 |
| Gene Name: | minichromosome maintenance complex component 4 |
| Gene Alias: | DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 |
| Gene Description: | protein kinase, DNA-activated, catalytic subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
