Difference between revisions of "TSS:Hg 219872.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000423613.6:15 uc010mvf.5:15 BC151843:15 |chr=chr9 |cpg_percent=0.02 |distance=15 |distance_to_tss=5485 |end=115112772 |entrez_id=3371 |gc_percent...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |DFNA56= |
| + | |GMEM= | ||
| + | |GP= | ||
| + | |HXB= | ||
| + | |JI= | ||
| + | |TN= | ||
| + | |TN-C= | ||
| + | |all_trans=HGNC:5318 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=15 | |distance=15 | ||
| − | |distance_to_tss= | + | |distance_to_tss=5385 |
|end=115112772 | |end=115112772 | ||
| + | |end_of_center_position=115112772 | ||
|entrez_id=3371 | |entrez_id=3371 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=150-225 | + | |gene_alias=150-225{{!}}DFNA56{{!}}GMEM{{!}}GP{{!}}HXB{{!}}JI{{!}}TN{{!}}TN-C |
|gene_description=tenascin C | |gene_description=tenascin C | ||
|gene_id=3371 | |gene_id=3371 | ||
| Line 21: | Line 29: | ||
|nearest_refseq=NM_002160 | |nearest_refseq=NM_002160 | ||
|nearest_unigene=Hs.143250 | |nearest_unigene=Hs.143250 | ||
| − | |num_trans= | + | |num_trans=3371 |
|species=human | |species=human | ||
|start=115112771 | |start=115112771 | ||
| + | |start_of_center_position=115112771 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000423613.6 | + | |transcript_name=ENST00000423613.6 BC151843 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_219872.1 | |tss_id=hg_219872.1 | ||
Latest revision as of 07:22, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115112771 |
|---|---|
| End of the center position in the TSS region: | 115112772 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000423613.6 BC151843 |
|---|---|
| Distance: | 15 |
| Num_trans: | 3371 |
| All_trans: | HGNC:5318 |
TATA-Box annotation
| Distance to TSS: | 5385 |
|---|---|
| Nearest PromoterID: | NM_002160 |
| Entrez ID: | 3371 |
| Nearest Unigene: | Hs.143250 |
| Nearest Refseq: | NM_002160 |
| Nearest Ensembl: | ENSG00000041982 |
| Gene Name: | tenascin C |
| Gene Alias: | 150-225|DFNA56|GMEM|GP|HXB|JI|TN|TN-C |
| Gene Description: | tenascin C |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
