Difference between revisions of "TSS:Hg 219874.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AL133161:-103 |chr=chr9 |cpg_percent=0.025 |distance=-103 |distance_to_tss=108393 |end=120471777 |entrez_id=55755 |gc_percent=0.472637 |gene_alias=C48|C...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Cep215= |
| + | |MCPH3= | ||
| + | |all_trans=HGNC:18672 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=-103 | |distance=-103 | ||
| − | |distance_to_tss= | + | |distance_to_tss=108390 |
|end=120471777 | |end=120471777 | ||
| + | |end_of_center_position=120471777 | ||
|entrez_id=55755 | |entrez_id=55755 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=C48 | + | |gene_alias=C48{{!}}Cep215{{!}}MCPH3 |
|gene_description=CDK5 regulatory subunit associated protein 2 | |gene_description=CDK5 regulatory subunit associated protein 2 | ||
|gene_id=55755 | |gene_id=55755 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=HGNC:18672 | |hgnc_mgi_id=HGNC:18672 | ||
|nearest_ensembl=ENSG00000136861 | |nearest_ensembl=ENSG00000136861 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_073557 |
|nearest_refseq=NM_018249 | |nearest_refseq=NM_018249 | ||
|nearest_unigene=Hs.269560 | |nearest_unigene=Hs.269560 | ||
| − | |num_trans= | + | |num_trans=55755 |
|species=human | |species=human | ||
|start=120471776 | |start=120471776 | ||
| + | |start_of_center_position=120471776 | ||
|strand=- | |strand=- | ||
|transcript_name=AL133161 | |transcript_name=AL133161 | ||
Latest revision as of 07:22, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120471776 |
|---|---|
| End of the center position in the TSS region: | 120471777 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AL133161 |
|---|---|
| Distance: | -103 |
| Num_trans: | 55755 |
| All_trans: | HGNC:18672 |
TATA-Box annotation
| Distance to TSS: | 108390 |
|---|---|
| Nearest PromoterID: | NR_073557 |
| Entrez ID: | 55755 |
| Nearest Unigene: | Hs.269560 |
| Nearest Refseq: | NM_018249 |
| Nearest Ensembl: | ENSG00000136861 |
| Gene Name: | CDK5 regulatory subunit associated protein 2 |
| Gene Alias: | C48|Cep215|MCPH3 |
| Gene Description: | CDK5 regulatory subunit associated protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
