Difference between revisions of "TSS:Hg 219958.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:7881 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=-134 |
|distance_to_tss=6209 | |distance_to_tss=6209 | ||
|end=136513417 | |end=136513417 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=microRNA 4673 | |gene_description=microRNA 4673 | ||
| − | |gene_name= | + | |gene_id=4851 |
| + | |gene_name=notch receptor 1 | ||
| + | |gene_source=HGNC:7881 | ||
| + | |gene_symbol=NOTCH1 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:7881 | ||
|nearest_ensembl=ENSG00000263403 | |nearest_ensembl=ENSG00000263403 | ||
|nearest_promoter_id=NR_039820 | |nearest_promoter_id=NR_039820 | ||
|nearest_refseq=NR_039820 | |nearest_refseq=NR_039820 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=4851 |
|species=human | |species=human | ||
|start=136513416 | |start=136513416 | ||
|start_of_center_position=136513416 | |start_of_center_position=136513416 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000645828.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_219958.1 | |tss_id=hg_219958.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 07:23, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136513416 |
|---|---|
| End of the center position in the TSS region: | 136513417 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000645828.1 |
|---|---|
| Distance: | -134 |
| Num_trans: | 4851 |
| All_trans: | HGNC:7881 |
TATA-Box annotation
| Distance to TSS: | 6209 |
|---|---|
| Nearest PromoterID: | NR_039820 |
| Entrez ID: | 100616242 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039820 |
| Nearest Ensembl: | ENSG00000263403 |
| Gene Name: | notch receptor 1 |
| Gene Alias: | - |
| Gene Description: | microRNA 4673 |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
