Difference between revisions of "TSS:Hg 220025.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AB527866:-4 CR542284:-4 HQ258255:-4 KJ890954:-4 ENST00000375321.1:-121 uc001ivj.2:-121 Z14138:-121 ENST00000430603.1:234 uc057sno.1:234 |chr=chr10 |cpg_...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | | | + | |COT= |
| + | |EST= | ||
| + | |ESTF= | ||
| + | |MEKK8= | ||
| + | |TPL2= | ||
| + | |Tpl-2= | ||
| + | |all_trans=HGNC:6860 | ||
| + | |c-COT= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-4 | |distance=-4 | ||
| − | |distance_to_tss= | + | |distance_to_tss=4297 |
|end=30438943 | |end=30438943 | ||
| + | |end_of_center_position=30438943 | ||
|entrez_id=1326 | |entrez_id=1326 | ||
|gc_percent=0.313433 | |gc_percent=0.313433 | ||
| − | |gene_alias=AURA2 | + | |gene_alias=AURA2{{!}}COT{{!}}EST{{!}}ESTF{{!}}MEKK8{{!}}TPL2{{!}}Tpl-2{{!}}c-COT |
|gene_description=mitogen-activated protein kinase kinase kinase 8 | |gene_description=mitogen-activated protein kinase kinase kinase 8 | ||
|gene_id=1326 | |gene_id=1326 | ||
| Line 21: | Line 29: | ||
|nearest_refseq=NM_005204 | |nearest_refseq=NM_005204 | ||
|nearest_unigene=Hs.432453 | |nearest_unigene=Hs.432453 | ||
| − | |num_trans= | + | |num_trans=1326 |
|species=human | |species=human | ||
|start=30438942 | |start=30438942 | ||
| + | |start_of_center_position=30438942 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AB527866 CR542284 HQ258255 | + | |transcript_name=AB527866 CR542284 HQ258255 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_220025.1 | |tss_id=hg_220025.1 | ||
Latest revision as of 07:24, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 30438942 |
|---|---|
| End of the center position in the TSS region: | 30438943 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB527866 CR542284 HQ258255 |
|---|---|
| Distance: | -4 |
| Num_trans: | 1326 |
| All_trans: | HGNC:6860 |
TATA-Box annotation
| Distance to TSS: | 4297 |
|---|---|
| Nearest PromoterID: | NM_001320961 |
| Entrez ID: | 1326 |
| Nearest Unigene: | Hs.432453 |
| Nearest Refseq: | NM_005204 |
| Nearest Ensembl: | ENSG00000107968 |
| Gene Name: | mitogen-activated protein kinase kinase kinase 8 |
| Gene Alias: | AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT |
| Gene Description: | mitogen-activated protein kinase kinase kinase 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.313433 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
