Difference between revisions of "TSS:Hg 221754.1"
From referenceTSS
| Line 2: | Line 2: | ||
|HP2ALPHA2= | |HP2ALPHA2= | ||
|HPA1S= | |HPA1S= | ||
| − | |all_trans= | + | |all_trans=HGNC:5141 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_005143 | |nearest_refseq=NM_005143 | ||
|nearest_unigene=Hs.513711 | |nearest_unigene=Hs.513711 | ||
| − | |num_trans= | + | |num_trans=3240 |
|species=human | |species=human | ||
|start=72054541 | |start=72054541 | ||
| Line 30: | Line 30: | ||
|strand=+ | |strand=+ | ||
|tata_box=49(CAGCATAAAAAG,-,0.00),51(GCATAAAAAGAC,+,0.00) | |tata_box=49(CAGCATAAAAAG,-,0.00),51(GCATAAAAAGAC,+,0.00) | ||
| − | |transcript_name=ENST00000355906.10 | + | |transcript_name=ENST00000355906.10 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_221754.1 | |tss_id=hg_221754.1 | ||
Latest revision as of 07:43, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72054541 |
|---|---|
| End of the center position in the TSS region: | 72054542 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000355906.10 |
|---|---|
| Distance: | -37 |
| Num_trans: | 3240 |
| All_trans: | HGNC:5141 |
TATA-Box annotation
| Distance to TSS: | 37 |
|---|---|
| Nearest PromoterID: | NM_005143 |
| Entrez ID: | 3240 |
| Nearest Unigene: | Hs.513711 |
| Nearest Refseq: | NM_005143 |
| Nearest Ensembl: | ENSG00000257017 |
| Gene Name: | haptoglobin |
| Gene Alias: | BP|HP2ALPHA2|HPA1S |
| Gene Description: | haptoglobin |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 49(CAGCATAAAAAG,-,0.00),51(GCATAAAAAGAC,+,0.00) |
