Difference between revisions of "TSS:Hg 223488.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000235310.7:0 uc001asq.5:0 AK094316:0 NM_001127325:26 ENST00000376667.7:38 uc009vnc.4:38 ENST00000376655.1:54 uc057cgw.1:54 ENST00000376672.5:170...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |MAD2B= |
| + | |POLZ2= | ||
| + | |REV7= | ||
| + | |all_trans=HGNC:6764 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-29 | |distance_to_tss=-29 | ||
|end=11691653 | |end=11691653 | ||
| + | |end_of_center_position=11691650 | ||
|entrez_id=10459 | |entrez_id=10459 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=FANCV | + | |gene_alias=FANCV{{!}}MAD2B{{!}}POLZ2{{!}}REV7 |
| − | |gene_description= | + | |gene_description=mitotic arrest deficient 2 like 2 |
|gene_id=10459 | |gene_id=10459 | ||
| − | |gene_name= | + | |gene_name=mitotic arrest deficient 2 like 2 |
|gene_source=HGNC:6764 | |gene_source=HGNC:6764 | ||
|gene_symbol=MAD2L2 | |gene_symbol=MAD2L2 | ||
| − | |gene_synonyms=MAD2B POLZ2 REV7 | + | |gene_synonyms=FANCV MAD2B POLZ2 REV7 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:6764 | |hgnc_mgi_id=HGNC:6764 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_006341 | |nearest_refseq=NM_006341 | ||
|nearest_unigene=Hs.19400 | |nearest_unigene=Hs.19400 | ||
| − | |num_trans= | + | |num_trans=10459 |
|species=human | |species=human | ||
|start=11691646 | |start=11691646 | ||
| + | |start_of_center_position=11691649 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000235310.7 | + | |transcript_name=ENST00000235310.7 AK094316 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_223488.1 | |tss_id=hg_223488.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A024R4I4 | + | |uniprot_id=A0A024R4I4 |
}} | }} | ||
Latest revision as of 08:01, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11691649 |
|---|---|
| End of the center position in the TSS region: | 11691650 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000235310.7 AK094316 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10459 |
| All_trans: | HGNC:6764 |
TATA-Box annotation
| Distance to TSS: | -29 |
|---|---|
| Nearest PromoterID: | NM_001127325 |
| Entrez ID: | 10459 |
| Nearest Unigene: | Hs.19400 |
| Nearest Refseq: | NM_006341 |
| Nearest Ensembl: | ENSG00000116670 |
| Gene Name: | mitotic arrest deficient 2 like 2 |
| Gene Alias: | FANCV|MAD2B|POLZ2|REV7 |
| Gene Description: | mitotic arrest deficient 2 like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
