Difference between revisions of "TSS:Hg 224337.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NR_003611:-10 ENST00000580094.5:-69 AL832069:85 BC065722:104 AK307333:110 BC017177:121 BC024278:121 |chr=chr10 |cpg_percent=0.12 |distance=-10 |distance...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |GLUDP2= | ||
| + | |GLUDP7= | ||
|all_trans=NR_003611:-10 ENST00000580094.5:-69 AL832069:85 BC065722:104 AK307333:110 BC017177:121 BC024278:121 | |all_trans=NR_003611:-10 ENST00000580094.5:-69 AL832069:85 BC065722:104 AK307333:110 BC017177:121 BC024278:121 | ||
| + | |bA342C24.3= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=17 | |distance_to_tss=17 | ||
|end=46786764 | |end=46786764 | ||
| + | |end_of_center_position=46786754 | ||
|entrez_id=414212 | |entrez_id=414212 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias= | + | |gene_alias=GLUD1P7{{!}}GLUDP2{{!}}GLUDP7 |
| − | |gene_description=glutamate dehydrogenase 1 pseudogene | + | |gene_description=glutamate dehydrogenase 1 pseudogene 2 |
|gene_id=399761 | |gene_id=399761 | ||
| − | |gene_name= | + | |gene_name=BMS1 pseudogene 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:23649 |
| − | |gene_symbol= | + | |gene_symbol=BMS1P1 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=pseudo | |gene_type=pseudo | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:23649 |
|nearest_ensembl=ENSG00000265366 | |nearest_ensembl=ENSG00000265366 | ||
|nearest_promoter_id=NR_111968 | |nearest_promoter_id=NR_111968 | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=46786742 | |start=46786742 | ||
| + | |start_of_center_position=46786753 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NR_003611 | + | |transcript_name=NR_003611.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_224337.1 | |tss_id=hg_224337.1 | ||
Latest revision as of 08:19, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 46786753 |
|---|---|
| End of the center position in the TSS region: | 46786754 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_003611.2 |
|---|---|
| Distance: | -10 |
| Num_trans: | 7 |
| All_trans: | NR_003611:-10 ENST00000580094.5:-69 AL832069:85 BC065722:104 AK307333:110 BC017177:121 BC024278:121 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NR_111968 |
| Entrez ID: | 414212 |
| Nearest Unigene: | Hs.661155 |
| Nearest Refseq: | NR_048574 |
| Nearest Ensembl: | ENSG00000265366 |
| Gene Name: | BMS1 pseudogene 1 |
| Gene Alias: | GLUD1P7|GLUDP2|GLUDP7 |
| Gene Description: | glutamate dehydrogenase 1 pseudogene 2 |
| Gene Type: | pseudo |
| CpG%: | 0.12 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
