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Difference between revisions of "TSS:Hg 226525.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000521575.1:-22 AK308530:-22 ENST00000381365.4:56 NM_001145536:56 AK309386:92 AK128415:173 LF209173:181 MA444750:181 LF326561:328 MA562138:328
+
|all_trans=HGNC:37238
 
|chr=chr17
 
|chr=chr17
 
|cpg_percent=0.11
 
|cpg_percent=0.11
Line 22: Line 22:
 
|nearest_refseq=NM_001145536
 
|nearest_refseq=NM_001145536
 
|nearest_unigene=Hs.579243
 
|nearest_unigene=Hs.579243
|num_trans=10
+
|num_trans=100130311
 
|species=human
 
|species=human
 
|start=4899439
 
|start=4899439

Latest revision as of 09:06, 21 July 2021

Basic information about the TSS


TSS ID:hg_226525.1
Species:human
Chr:chr17
TSS Classification:yes
Start:4899439
End:4899480
Strand:+
TSS Score:1
Start of the center position in the TSS region:4899459
End of the center position in the TSS region:4899460



Gene and protein annotation


Transcript_name:ENST00000521575.1 AK308530
Distance:-22
GeneID:100130311
HGNC/MGI_ID:HGNC:37238
UniProt_ID:E5RJ01
Gene_name:chromosome 17 open reading frame 107
Gene_symbol:C17orf107
Gene_synonyms:
Gene_source:HGNC:37238



Transcript annotation


Transcript_name:ENST00000521575.1 AK308530
Distance:-22
Num_trans:100130311
All_trans:HGNC:37238



TATA-Box annotation


Distance to TSS:-76
Nearest PromoterID:NM_001145536
Entrez ID:100130311
Nearest Unigene:Hs.579243
Nearest Refseq:NM_001145536
Nearest Ensembl:ENSG00000205710
Gene Name:chromosome 17 open reading frame 107
Gene Alias:-
Gene Description:chromosome 17 open reading frame 107
Gene Type:protein-coding
CpG%:0.11
GC%:0.696517
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):