Difference between revisions of "TSS:Hg 229693.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_005471:0 ENST00000505689.5:9 uc063idy.1:9 ENST00000311337.10:19 ENST00000504139.5:19 uc010jgh.4:19 uc063idx.1:19 ENST00000500692.6:20 uc063idw.1:20 E...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |GNPDA= |
| + | |GNPI= | ||
| + | |GPI= | ||
| + | |HLN= | ||
| + | |all_trans=HGNC:4417 | ||
|chr=chr5 | |chr=chr5 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance= | + | |distance=9 |
| − | |distance_to_tss= | + | |distance_to_tss=-26 |
|end=142013056 | |end=142013056 | ||
| + | |end_of_center_position=142013053 | ||
|entrez_id=10007 | |entrez_id=10007 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| − | |gene_alias=GNP1 | + | |gene_alias=GNP1{{!}}GNPDA{{!}}GNPI{{!}}GPI{{!}}HLN |
|gene_description=glucosamine-6-phosphate deaminase 1 | |gene_description=glucosamine-6-phosphate deaminase 1 | ||
|gene_id=10007 | |gene_id=10007 | ||
| Line 21: | Line 26: | ||
|nearest_refseq=NM_005471 | |nearest_refseq=NM_005471 | ||
|nearest_unigene=Hs.633853 | |nearest_unigene=Hs.633853 | ||
| − | |num_trans= | + | |num_trans=10007 |
|species=human | |species=human | ||
|start=142013049 | |start=142013049 | ||
| + | |start_of_center_position=142013052 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000505689.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_229693.1 | |tss_id=hg_229693.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=D6RFF8 |
}} | }} | ||
Latest revision as of 10:13, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 142013052 |
|---|---|
| End of the center position in the TSS region: | 142013053 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000505689.5 |
|---|---|
| Distance: | 9 |
| Num_trans: | 10007 |
| All_trans: | HGNC:4417 |
TATA-Box annotation
| Distance to TSS: | -26 |
|---|---|
| Nearest PromoterID: | NM_005471 |
| Entrez ID: | 10007 |
| Nearest Unigene: | Hs.633853 |
| Nearest Refseq: | NM_005471 |
| Nearest Ensembl: | ENSG00000113552 |
| Gene Name: | glucosamine-6-phosphate deaminase 1 |
| Gene Alias: | GNP1|GNPDA|GNPI|GPI|HLN |
| Gene Description: | glucosamine-6-phosphate deaminase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
