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Difference between revisions of "TSS:Hg 231570.1"

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Line 2: Line 2:
 
|PGR1=
 
|PGR1=
 
|ZADH3=
 
|ZADH3=
|all_trans=ENST00000422125.1:-18 ENST00000407693.7:26 NM_001146108:26 AK309450:26 AK091948:28 D49387:48 ENST00000374313.5:-139 AK309866:-144 ENST00000538962.7:-158 AK298379:-158 NM_001146109:-178 AK289597:-178 ENST00000466771.6:-216 NM_012212:242 BC035228:242 ENST00000309195.9:266 ENST00000374308.1:266
+
|all_trans=HGNC:18429
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.055
 
|cpg_percent=0.055
Line 24: Line 24:
 
|nearest_refseq=NM_012212
 
|nearest_refseq=NM_012212
 
|nearest_unigene=Hs.584864
 
|nearest_unigene=Hs.584864
|num_trans=17
+
|num_trans=22949
 
|species=human
 
|species=human
 
|start=111599672
 
|start=111599672

Latest revision as of 10:52, 21 July 2021

Basic information about the TSS


TSS ID:hg_231570.1
Species:human
Chr:chr9
TSS Classification:yes
Start:111599672
End:111599677
Strand:-
TSS Score:1
Start of the center position in the TSS region:111599674
End of the center position in the TSS region:111599675



Gene and protein annotation


Transcript_name:ENST00000422125.1
Distance:-18
GeneID:22949
HGNC/MGI_ID:HGNC:18429
UniProt_ID:Q5JVP2
Gene_name:prostaglandin reductase 1
Gene_symbol:PTGR1
Gene_synonyms:ZADH3
Gene_source:HGNC:18429



Transcript annotation


Transcript_name:ENST00000422125.1
Distance:-18
Num_trans:22949
All_trans:HGNC:18429



TATA-Box annotation


Distance to TSS:-28
Nearest PromoterID:NM_001146108
Entrez ID:22949
Nearest Unigene:Hs.584864
Nearest Refseq:NM_012212
Nearest Ensembl:ENSG00000106853
Gene Name:prostaglandin reductase 1
Gene Alias:LTB4DH|PGR1|ZADH3
Gene Description:prostaglandin reductase 1
Gene Type:protein-coding
CpG%:0.055
GC%:0.651741
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):