Difference between revisions of "TSS:Hg 231570.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000422125.1:-18 uc064vbc.1:-18 AK309450:26 AK091948:28 D49387:48 ENST00000374313.5:-139 uc064vbd.1:-139 AK309866:-144 AK298379:-158 ENST0000053896...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |PGR1= |
| + | |ZADH3= | ||
| + | |all_trans=HGNC:18429 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=-18 | |distance=-18 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-28 |
|end=111599677 | |end=111599677 | ||
| + | |end_of_center_position=111599675 | ||
|entrez_id=22949 | |entrez_id=22949 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=LTB4DH | + | |gene_alias=LTB4DH{{!}}PGR1{{!}}ZADH3 |
|gene_description=prostaglandin reductase 1 | |gene_description=prostaglandin reductase 1 | ||
|gene_id=22949 | |gene_id=22949 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_012212 | |nearest_refseq=NM_012212 | ||
|nearest_unigene=Hs.584864 | |nearest_unigene=Hs.584864 | ||
| − | |num_trans= | + | |num_trans=22949 |
|species=human | |species=human | ||
|start=111599672 | |start=111599672 | ||
| + | |start_of_center_position=111599674 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000422125 | + | |transcript_name=ENST00000422125.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_231570.1 | |tss_id=hg_231570.1 | ||
Latest revision as of 10:52, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 111599674 |
|---|---|
| End of the center position in the TSS region: | 111599675 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000422125.1 |
|---|---|
| Distance: | -18 |
| Num_trans: | 22949 |
| All_trans: | HGNC:18429 |
TATA-Box annotation
| Distance to TSS: | -28 |
|---|---|
| Nearest PromoterID: | NM_001146108 |
| Entrez ID: | 22949 |
| Nearest Unigene: | Hs.584864 |
| Nearest Refseq: | NM_012212 |
| Nearest Ensembl: | ENSG00000106853 |
| Gene Name: | prostaglandin reductase 1 |
| Gene Alias: | LTB4DH|PGR1|ZADH3 |
| Gene Description: | prostaglandin reductase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
